Curated BLAST for Genomes


Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 25 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT4554: purine nucleoside phosphorylase II (NCBI ptt file)
is similar to:

Udp / b3831: uridine phosphorylase (EC; EC from Escherichia coli
udp / P12758: uridine phosphorylase (EC from Escherichia coli

29% id,
96% cov

TK1479 / Q5JJC1: uridine phosphorylase (EC from Thermococcus kodakarensis

29% id,
85% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory