Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 19 curated entries in PaperBLAST's database that match '2.5.1.48'.

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT2387: O-acetylhomoserine (thiol)-lyase (NCBI ptt file) is similar to:	PaperBLAST
metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa	36% id, 96% cov
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.	34% id, 99% cov
HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae	33% id, 99% cov
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori	40% id, 56% cov
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum	39% id, 55% cov
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis	35% id, 54% cov
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans	34% id, 54% cov
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori	40% id, 40% cov
L0EKR2: cystathionine gamma-synthase (EC 2.5.1.48) from Lens culinaris	31% id, 52% cov
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis	38% id, 40% cov
METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli	32% id, 48% cov
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans	38% id, 40% cov
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum	37% id, 39% cov
CGS1_ARATH / P55217: Cystathionine gamma-synthase 1, chloroplastic; AtCGS1; METHIONINE OVERACCUMULATION 1; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Arabidopsis thaliana CGS1 / P55217: cystathionine γ-synthase (EC 2.5.1.48) from Arabidopsis thaliana	37% id, 39% cov
L0EK12: cystathionine gamma-synthase (EC 2.5.1.48) from Cicer arietinum	36% id, 39% cov
L0EK12: cystathionine gamma-synthase (EC 2.5.1.48) from Cicer arietinum	34% id, 34% cov
More...

BT1923: O-acetylhomoserine (thiol)-lyase (NCBI ptt file) is similar to:	PaperBLAST
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum	34% id, 97% cov
HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae	33% id, 93% cov
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.	33% id, 92% cov
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori	42% id, 50% cov
metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa	38% id, 54% cov
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis	36% id, 54% cov
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans	35% id, 54% cov
METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli	34% id, 54% cov
metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa	37% id, 42% cov
L0EK12: cystathionine gamma-synthase (EC 2.5.1.48) from Cicer arietinum	34% id, 37% cov
METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli	31% id, 40% cov
CGS1_ARATH / P55217: Cystathionine gamma-synthase 1, chloroplastic; AtCGS1; METHIONINE OVERACCUMULATION 1; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Arabidopsis thaliana CGS1 / P55217: cystathionine γ-synthase (EC 2.5.1.48) from Arabidopsis thaliana	31% id, 39% cov
L0EKR2: cystathionine gamma-synthase (EC 2.5.1.48) from Lens culinaris	31% id, 37% cov
CGS1_ARATH / P55217: Cystathionine gamma-synthase 1, chloroplastic; AtCGS1; METHIONINE OVERACCUMULATION 1; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Arabidopsis thaliana CGS1 / P55217: cystathionine γ-synthase (EC 2.5.1.48) from Arabidopsis thaliana	37% id, 27% cov
L0EKR2: cystathionine gamma-synthase (EC 2.5.1.48) from Lens culinaris	36% id, 29% cov
L0EK12: cystathionine gamma-synthase (EC 2.5.1.48) from Cicer arietinum	35% id, 29% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory