Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 32 curated entries in PaperBLAST's database that match '2.6.1.13' as complete word(s).

These curated entries have 26 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3758: acetylornithine aminotransferase (NCBI ptt file) is similar to:	PaperBLAST
aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa	36% id, 92% cov
OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis	34% id, 94% cov
ORNAT_PYRHO / O50131: Ornithine aminotransferase; Orn-AT; Ornithine delta-aminotransferase; EC 2.6.1.13 from Pyrococcus horikoshii	33% id, 90% cov
OAT_KLULA / Q6CWC1: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Kluyveromyces lactis	32% id, 89% cov
OAT_YEAST / P07991: Ornithine aminotransferase; OTAse; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Saccharomyces cerevisiae	31% id, 89% cov
B1A0U3: ornithine aminotransferase (EC 2.6.1.13) from Pisum sativum	33% id, 83% cov
OAT_ARATH / Q9FNK4: Ornithine aminotransferase, mitochondrial; Ornithine delta-aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Arabidopsis thaliana δ-OAT / Q9FNK4: ornithine-δ-aminotransferase (EC 2.6.1.13) from Arabidopsis thaliana Q9FNK4: ornithine aminotransferase (EC 2.6.1.13) from Arabidopsis thaliana	34% id, 80% cov
OAT_RAT / P04182: Ornithine aminotransferase, mitochondrial; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Rattus norvegicus	32% id, 85% cov
OAT_PLAF7 / Q6LFH8: Ornithine aminotransferase; PfOAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Plasmodium falciparum Q6LFH8: ornithine aminotransferase (EC 2.6.1.13) from Plasmodium falciparum	30% id, 90% cov
OAT_HUMAN / P04181: Ornithine aminotransferase, mitochondrial; Ornithine delta-aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Homo sapiens OAT / P04181: Ornithine aminotransferase (EC 2.6.1.13) from Homo sapiens	31% id, 87% cov
Q3ZCF5: ornithine aminotransferase (EC 2.6.1.13) from Bos taurus	31% id, 85% cov
Echvi_0577: Ornithine aminotransferase (EC 2.6.1.13) from Echinicola vietnamensis	29% id, 92% cov
OAT_SCHPO / Q9P7L5: Ornithine aminotransferase car2; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Schizosaccharomyces pombe car2 / RF\|NP_596588.1: ornithine transaminase Car2; EC 2.6.1.13 from Schizosaccharomyces pombe	29% id, 90% cov
S8EY38: ornithine aminotransferase (EC 2.6.1.13) from Toxoplasma gondii	30% id, 86% cov
OAT_EMENI / Q92413: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Emericella nidulans otaA: ornithine aminotransferase; EC 2.6.1.13 from Emericella nidulans	30% id, 87% cov
Q98TS5: ornithine aminotransferase (EC 2.6.1.13) from Xenopus laevis	30% id, 85% cov
δOAT / Q1RPP3: ornithine δ-aminotransferase (EC 2.6.1.13) from Pinus sylvestris	32% id, 81% cov
OAT_ORYSJ / Q10G56: Ornithine aminotransferase, mitochondrial; Ornithine delta-aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Oryza sativa	31% id, 80% cov
A0A3B6MXE9: ornithine aminotransferase (EC 2.6.1.13) from Triticum aestivum	31% id, 80% cov
A0A5F9CII4: ornithine aminotransferase (EC 2.6.1.13) from Oryctolagus cuniculus	30% id, 82% cov
A0A3B6LSQ4: ornithine aminotransferase (EC 2.6.1.13) from Triticum aestivum	30% id, 81% cov
A0A3B6KM96: ornithine aminotransferase (EC 2.6.1.13) from Triticum aestivum	30% id, 81% cov
Q2Z0F8: ornithine aminotransferase (EC 2.6.1.13) from Agaricus bisporus	29% id, 82% cov
A0A674DA32: ornithine aminotransferase (EC 2.6.1.13) from Salmo trutta	29% id, 75% cov
P31893: ornithine aminotransferase (EC 2.6.1.13) from Vigna aconitifolia	26% id, 72% cov
ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis	37% id, 49% cov
ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis	37% id, 28% cov
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BT1442: adenosylmethionine-8-amino-7-oxononanoate aminotransferase (NCBI ptt file) is similar to:	PaperBLAST
OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis	31% id, 96% cov
aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa	30% id, 97% cov
ORNAT_PYRHO / O50131: Ornithine aminotransferase; Orn-AT; Ornithine delta-aminotransferase; EC 2.6.1.13 from Pyrococcus horikoshii	31% id, 94% cov
OAT_KLULA / Q6CWC1: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Kluyveromyces lactis	31% id, 92% cov
Echvi_0577: Ornithine aminotransferase (EC 2.6.1.13) from Echinicola vietnamensis	29% id, 97% cov
Q3ZCF5: ornithine aminotransferase (EC 2.6.1.13) from Bos taurus	29% id, 97% cov
OAT_RAT / P04182: Ornithine aminotransferase, mitochondrial; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Rattus norvegicus	28% id, 98% cov
OAT_HUMAN / P04181: Ornithine aminotransferase, mitochondrial; Ornithine delta-aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Homo sapiens OAT / P04181: Ornithine aminotransferase (EC 2.6.1.13) from Homo sapiens	29% id, 96% cov
Q98TS5: ornithine aminotransferase (EC 2.6.1.13) from Xenopus laevis	28% id, 97% cov
OAT_YEAST / P07991: Ornithine aminotransferase; OTAse; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Saccharomyces cerevisiae	28% id, 96% cov
OAT_SCHPO / Q9P7L5: Ornithine aminotransferase car2; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Schizosaccharomyces pombe car2 / RF\|NP_596588.1: ornithine transaminase Car2; EC 2.6.1.13 from Schizosaccharomyces pombe	29% id, 93% cov
OAT_PLAF7 / Q6LFH8: Ornithine aminotransferase; PfOAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Plasmodium falciparum Q6LFH8: ornithine aminotransferase (EC 2.6.1.13) from Plasmodium falciparum	28% id, 93% cov
A0A5F9CII4: ornithine aminotransferase (EC 2.6.1.13) from Oryctolagus cuniculus	29% id, 89% cov
OAT_EMENI / Q92413: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Emericella nidulans otaA: ornithine aminotransferase; EC 2.6.1.13 from Emericella nidulans	28% id, 92% cov
S8EY38: ornithine aminotransferase (EC 2.6.1.13) from Toxoplasma gondii	28% id, 92% cov
B1A0U3: ornithine aminotransferase (EC 2.6.1.13) from Pisum sativum	30% id, 85% cov
ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis	28% id, 90% cov
OAT_ORYSJ / Q10G56: Ornithine aminotransferase, mitochondrial; Ornithine delta-aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Oryza sativa	30% id, 85% cov
Q2Z0F8: ornithine aminotransferase (EC 2.6.1.13) from Agaricus bisporus	28% id, 89% cov
A0A3B6KM96: ornithine aminotransferase (EC 2.6.1.13) from Triticum aestivum	30% id, 82% cov
A0A3B6LSQ4: ornithine aminotransferase (EC 2.6.1.13) from Triticum aestivum	30% id, 83% cov
A0A3B6MXE9: ornithine aminotransferase (EC 2.6.1.13) from Triticum aestivum	29% id, 85% cov
OAT_ARATH / Q9FNK4: Ornithine aminotransferase, mitochondrial; Ornithine delta-aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Arabidopsis thaliana δ-OAT / Q9FNK4: ornithine-δ-aminotransferase (EC 2.6.1.13) from Arabidopsis thaliana Q9FNK4: ornithine aminotransferase (EC 2.6.1.13) from Arabidopsis thaliana	28% id, 84% cov
δOAT / Q1RPP3: ornithine δ-aminotransferase (EC 2.6.1.13) from Pinus sylvestris	28% id, 85% cov
A0A674DA32: ornithine aminotransferase (EC 2.6.1.13) from Salmo trutta	27% id, 87% cov
P31893: ornithine aminotransferase (EC 2.6.1.13) from Vigna aconitifolia	26% id, 80% cov
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The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

4878480-4879628 (frame -2) on 241 is similar to:	PaperBLAST
OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis Also see hits to annotated proteins above	33% id, 99% cov
OAT_KLULA / Q6CWC1: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Kluyveromyces lactis Also see hits to annotated proteins above	31% id, 93% cov
OAT_ARATH / Q9FNK4: Ornithine aminotransferase, mitochondrial; Ornithine delta-aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Arabidopsis thaliana δ-OAT / Q9FNK4: ornithine-δ-aminotransferase (EC 2.6.1.13) from Arabidopsis thaliana Q9FNK4: ornithine aminotransferase (EC 2.6.1.13) from Arabidopsis thaliana Also see hits to annotated proteins above	34% id, 83% cov
Echvi_0577: Ornithine aminotransferase (EC 2.6.1.13) from Echinicola vietnamensis Also see hits to annotated proteins above	28% id, 96% cov
More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory