Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 23 curated entries in PaperBLAST's database that match '2.6.1.27'.

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3892: branched-chain amino acid aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

29% id,
97% cov

BT2415: aspartate aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

TAT / P17735: Tyrosine aminotransferase (EC 2.6.1.27) from Homo sapiens

28% id,
82% cov

Tat / P04694: tyrosine aminotransferase subunit (EC 2.6.1.27) from Rattus norvegicus

28% id,
80% cov

BT3720: putative aspartate aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana
ISS1 / Q9C969: aromatic aminotransferase ISS1 (EC 2.6.1.27) from Arabidopsis thaliana

24% id,
95% cov

BT1476: aspartate aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

TAT / P17735: Tyrosine aminotransferase (EC 2.6.1.27) from Homo sapiens

26% id,
81% cov

Tat / P04694: tyrosine aminotransferase subunit (EC 2.6.1.27) from Rattus norvegicus

27% id,
79% cov

BT3935: aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

Tat / P04694: tyrosine aminotransferase subunit (EC 2.6.1.27) from Rattus norvegicus

26% id,
49% cov

TAT / P17735: Tyrosine aminotransferase (EC 2.6.1.27) from Homo sapiens

26% id,
49% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory