Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 75 curated entries in PaperBLAST's database that match '2.6.1.42' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3892: branched-chain amino acid aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

Q7BPX6: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Lactococcus lactis

51% id,
99% cov

A0A5Q8BPF5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Lacticaseibacillus paracasei

50% id,
98% cov

Q8DTW7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Streptococcus mutans

49% id,
99% cov

More...

BT2415: aspartate aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

23% id,
99% cov

BT1476: aspartate aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.

26% id,
78% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory