Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 75 curated entries in PaperBLAST's database that match '2.6.1.9'.

These curated entries have 51 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT0202: histidinol-phosphate aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

BT0202: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Bacteroides thetaiotaomicron

100% id,
100% cov

his3 / GI|1174375: histidinol-phosphate aminotransferase imidazole acetol phosphate transaminase His3; EC 2.6.1.9 from Schizosaccharomyces pombe

37% id,
97% cov

HIS8_CALS4 / Q8R5Q4: Histidinol-phosphate aminotransferase; Histidine transaminase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9; EC 2.6.1.38 from Caldanaerobacter subterraneus

34% id,
99% cov

More...

BT0612: putative aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

BC_5273 / Q814Z4: UDP-4(S)-amino-sugar transaminase monomer (EC 2.6.1.92) from Bacillus cereus

53% id,
98% cov

wcfR / Q5LFK4: UDP-acetamido-4-amino-6-deoxygalactopyranose transaminase subunit (EC 2.6.1.92) from Bacteroides fragilis

37% id,
96% cov

PSEC_CAMJJ / Q5QKR7: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Pseudaminic acid biosynthesis protein C; EC 2.6.1.92 from Campylobacter jejuni

28% id,
98% cov

More...

BT2885: nucleotide sugar transaminase (NCBI ptt file)
is similar to:
PaperBLAST

FDTB_ANETH / Q6T1W6: dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase; dTDP-6-deoxy-D-xylo-hex-3-ulose aminase; EC 2.6.1.90 from Aneurinibacillus thermoaerophilus
fdtB / Q6T1W6: dTDP-3-amino-3,6-dideoxy-α-D-galactopyranose transaminase (EC 2.6.1.90) from Aneurinibacillus thermoaerophilus
Q6T1W6: dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase (EC 2.6.1.90) from Aneurinibacillus thermoaerophilus

30% id,
99% cov

YfbE / b2253: UDP-4-amino-4-deoxy-L-arabinose aminotransferase (EC 2.6.1.92; EC 2.6.1.87) from Escherichia coli
arnB / P77690: UDP-4-amino-4-deoxy-L-arabinose aminotransferase (EC 2.6.1.92) from Escherichia coli

31% id,
94% cov

WBPE_PSEAE / Q9HZ76: UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase; UDP-3-oxo-D-GlcNAcA aminotransferase; UDP-2-acetamido-2-deoxy-alpha-D-ribo-hex-3-uluronic acid transaminase; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase; EC 2.6.1.98 from Pseudomonas aeruginosa
wbpE / Q9HZ76: UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase (EC 2.6.1.98) from Pseudomonas aeruginosa
Q9HZ76: UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase (EC 2.6.1.98) from Pseudomonas aeruginosa

33% id,
86% cov

More...

BT3376: nucleotide sugar transaminase (NCBI ptt file)
is similar to:
PaperBLAST

WBPE_PSEAE / Q9HZ76: UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase; UDP-3-oxo-D-GlcNAcA aminotransferase; UDP-2-acetamido-2-deoxy-alpha-D-ribo-hex-3-uluronic acid transaminase; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase; EC 2.6.1.98 from Pseudomonas aeruginosa
wbpE / Q9HZ76: UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase (EC 2.6.1.98) from Pseudomonas aeruginosa
Q9HZ76: UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase (EC 2.6.1.98) from Pseudomonas aeruginosa

32% id,
88% cov

PSEC_HELPY / O25130: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Pseudaminic acid biosynthesis protein C; EC 2.6.1.92 from Helicobacter pylori
pseC / O25130: PseC monomer (EC 2.6.1.92) from Helicobacter pylori
O25130: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase (EC 2.6.1.92) from Helicobacter pylori

28% id,
98% cov

FDTB_ANETH / Q6T1W6: dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase; dTDP-6-deoxy-D-xylo-hex-3-ulose aminase; EC 2.6.1.90 from Aneurinibacillus thermoaerophilus
fdtB / Q6T1W6: dTDP-3-amino-3,6-dideoxy-α-D-galactopyranose transaminase (EC 2.6.1.90) from Aneurinibacillus thermoaerophilus
Q6T1W6: dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase (EC 2.6.1.90) from Aneurinibacillus thermoaerophilus

30% id,
88% cov

More...

BT1442: adenosylmethionine-8-amino-7-oxononanoate aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

GATP2_SOLLC / Q84P53: Gamma aminobutyrate transaminase 2; Gamma-aminobutyrate transaminase isozyme 2; LeGABA-TP2; SlGABA-T2; EC 2.6.1.96 from Solanum lycopersicum
GABA-TP2 / Q84P53: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum
Q84P53: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

29% id,
94% cov

GATP1_SOLLC / Q84P54: Gamma aminobutyrate transaminase 1, mitochondrial; Gamma-aminobutyrate transaminase isozyme 1; LeGABA-TP1; SlGABA-T1; EC 2.6.1.96 from Solanum lycopersicum
GABA-TP1 / Q84P54: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum
Q84P54: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

30% id,
88% cov

GATP1_ORYSJ / Q7XN11: Gamma-aminobutyrate transaminase 1, mitochondrial; EC 2.6.1.96 from Oryza sativa

29% id,
86% cov

BT3758: acetylornithine aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

GATP2_SOLLC / Q84P53: Gamma aminobutyrate transaminase 2; Gamma-aminobutyrate transaminase isozyme 2; LeGABA-TP2; SlGABA-T2; EC 2.6.1.96 from Solanum lycopersicum
GABA-TP2 / Q84P53: gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum
Q84P53: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum

27% id,
92% cov

GATP4_ORYSJ / Q6ZH29: Probable gamma-aminobutyrate transaminase 4; OsGABA-T; EC 2.6.1.96 from Oryza sativa
Q6ZH29: 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa

25% id,
86% cov

GATP_ARATH / Q94CE5: Gamma-aminobutyrate transaminase POP2, mitochondrial; AtGABA-T; Gamma-aminobutyric acid aminotransferase 1; Protein HEXENAL RESPONSE 1; Protein POLLEN-PISTIL INCOMPATIBILITY 2; AtPOP2; EC 2.6.1.96 from Arabidopsis thaliana
POP2 / Q94CE5: γ-aminobutyrate transaminase (pyruvate dependent) (EC 2.6.1.96) from Arabidopsis thaliana
Q94CE5: 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Arabidopsis thaliana

25% id,
84% cov

More...

BT2415: aspartate aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

HIS8_CALS4 / Q8R5Q4: Histidinol-phosphate aminotransferase; Histidine transaminase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9; EC 2.6.1.38 from Caldanaerobacter subterraneus

26% id,
92% cov

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

25% id,
92% cov

BT0547: aspartate aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

23% id,
94% cov

BT0202: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Bacteroides thetaiotaomicron

24% id,
73% cov

P9WML7: histidinol-phosphate transaminase (EC 2.6.1.9) from Mycobacterium tuberculosis

23% id,
62% cov

More...

BT3935: aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

HIS8_CALS4 / Q8R5Q4: Histidinol-phosphate aminotransferase; Histidine transaminase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9; EC 2.6.1.38 from Caldanaerobacter subterraneus

27% id,
76% cov

BT3375: aspartate aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

HIS8_ZYMMO / P34037: Histidinol-phosphate aminotransferase; Imidazole acetol phosphate aminotransferase; IAP aminotransferase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9 from Zymomonas mobilis

25% id,
75% cov

wcfR / Q5LFK4: UDP-acetamido-4-amino-6-deoxygalactopyranose transaminase subunit (EC 2.6.1.92) from Bacteroides fragilis

35% id,
20% cov

BT1476: aspartate aminotransferase (NCBI ptt file)
is similar to:
PaperBLAST

HIS8_ZYMMO / P34037: Histidinol-phosphate aminotransferase; Imidazole acetol phosphate aminotransferase; IAP aminotransferase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9 from Zymomonas mobilis

27% id,
70% cov

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

26% id,
62% cov

BT0202: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Bacteroides thetaiotaomicron

27% id,
44% cov

BT3354: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

Q981C9: archaeosine synthase (EC 2.6.1.97) from Saccharolobus solfataricus

44% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory