Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 9 curated entries in PaperBLAST's database that match '2.7.1.144' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT2062: 6-phosphofructokinase (NCBI ptt file)
is similar to:
PaperBLAST

pfkA / P0A797: 6-phosphofructokinase subunit (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli

47% id,
99% cov

PFKA_MYCTU / P9WID7: ATP-dependent 6-phosphofructokinase; ATP-PFK; Phosphofructokinase; Phosphofructokinase A; Phosphohexokinase; Tagatose-6-phosphate kinase; EC 2.7.1.11; EC 2.7.1.144 from Mycobacterium tuberculosis

39% id,
97% cov

BT1102: 6-phosphofructokinase (NCBI ptt file)
is similar to:
PaperBLAST

pfkA / P0A797: 6-phosphofructokinase subunit (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli

46% id,
95% cov

PFKA_MYCTU / P9WID7: ATP-dependent 6-phosphofructokinase; ATP-PFK; Phosphofructokinase; Phosphofructokinase A; Phosphohexokinase; Tagatose-6-phosphate kinase; EC 2.7.1.11; EC 2.7.1.144 from Mycobacterium tuberculosis

38% id,
97% cov

BT3356: 6-phosphofructokinase (NCBI ptt file)
is similar to:
PaperBLAST

PFKA_MYCTU / P9WID7: ATP-dependent 6-phosphofructokinase; ATP-PFK; Phosphofructokinase; Phosphofructokinase A; Phosphohexokinase; Tagatose-6-phosphate kinase; EC 2.7.1.11; EC 2.7.1.144 from Mycobacterium tuberculosis

44% id,
97% cov

pfkA / P0A797: 6-phosphofructokinase subunit (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli

41% id,
90% cov

BT2803: ribokinase (NCBI ptt file)
is similar to:
PaperBLAST

PfkB / b1723: 6-phosphofructokinase 2 (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli
pfkB / P06999: 6-phosphofructokinase 2 (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli

25% id,
84% cov

LACC_LACLL / P23391: Tagatose-6-phosphate kinase; Phosphotagatokinase; EC 2.7.1.144 from Lactococcus lactis

23% id,
78% cov

PFKB_MYCTO / P9WID2: ATP-dependent 6-phosphofructokinase isozyme 2; ATP-PFK 2; Phosphofructokinase 2; Phosphofructokinase B; Phosphohexokinase 2; Tagatose-6-phosphate kinase; EC 2.7.1.11; EC 2.7.1.144 from Mycobacterium tuberculosis
PFKB_MYCTU / P9WID3: ATP-dependent 6-phosphofructokinase isozyme 2; ATP-PFK 2; Phosphofructokinase 2; Phosphofructokinase B; Phosphohexokinase 2; Tagatose-6-phosphate kinase; EC 2.7.1.11; EC 2.7.1.144 from Mycobacterium tuberculosis

35% id,
26% cov

BT2804: ribokinase (NCBI ptt file)
is similar to:
PaperBLAST

PfkB / b1723: 6-phosphofructokinase 2 (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli
pfkB / P06999: 6-phosphofructokinase 2 (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli

24% id,
83% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory