Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 16 curated entries in PaperBLAST's database that match '2.7.1.147'.

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT2493: ROK family transcriptional repressor, with glucokinase domain (NCBI ptt file)
is similar to:
PaperBLAST

Q8R8N4: ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus

37% id,
99% cov

BT4654: ROK family transcriptional repressor, with glucokinase domain (NCBI ptt file)
is similar to:
PaperBLAST

Q8R8N4: ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus

35% id,
99% cov

BT3600: ROK family transcriptional repressor (NCBI ptt file)
is similar to:
PaperBLAST

Q8R8N4: ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus

31% id,
100% cov

BT0433: putative xylose repressor (NCBI ptt file)
is similar to:
PaperBLAST

Q8R8N4: ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus

29% id,
99% cov

BT2104: ROK family member transcriptional repressor (NCBI ptt file)
is similar to:
PaperBLAST

Q8R8N4: ADP-specific glucose/glucosamine kinase (EC 2.7.1.147) from Caldanaerobacter subterraneus

27% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory