Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 31 curated entries in PaperBLAST's database that match '2.7.1.15' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT2804: ribokinase (NCBI ptt file)
is similar to:
PaperBLAST

BT2804: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron

100% id,
100% cov

Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

43% id,
98% cov

AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

43% id,
98% cov

More...

BT2803: ribokinase (NCBI ptt file)
is similar to:
PaperBLAST

BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron

100% id,
100% cov

BT2804: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron

46% id,
95% cov

A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae

45% id,
97% cov

More...

BT1757: fructokinase (NCBI ptt file)
is similar to:
PaperBLAST

Q8NQR0: ribokinase (EC 2.7.1.15) from Corynebacterium glutamicum

27% id,
89% cov

RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana
RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana
A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana

27% id,
78% cov

SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti

25% id,
40% cov

More...

BT2799: putative PfkB family carbohydrate kinase (NCBI ptt file)
is similar to:
PaperBLAST

BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron

28% id,
79% cov

BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans

25% id,
88% cov

RBSK_YEAST / P25332: Ribokinase; RK; EC 2.7.1.15 from Saccharomyces cerevisiae

26% id,
81% cov

More...

BT3576: putative ribokinase (NCBI ptt file)
is similar to:
PaperBLAST

Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

28% id,
70% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory