Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 29 curated entries in PaperBLAST's database that match '2.7.1.17' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT0792: xylulose kinase (xylulokinase) (NCBI ptt file)
is similar to:
PaperBLAST

BT0792: xylulokinase (EC 2.7.1.17) from Bacteroides thetaiotaomicron

100% id,
100% cov

Echvi_1875: xylulokinase (EC 2.7.1.17) from Echinicola vietnamensis

56% id,
99% cov

Q9WXX1: xylulokinase (EC 2.7.1.17) from Thermotoga maritima

31% id,
97% cov

More...

BT4423: xylulose kinase (NCBI ptt file)
is similar to:
PaperBLAST

C7NMH3: xylulokinase (EC 2.7.1.17) from Halorhabdus utahensis

35% id,
96% cov

BWI76_RS27020: Xylulose kinase (EC 2.7.1.17) from Klebsiella michiganensis

34% id,
100% cov

XYLB_ECOLI / P09099: Xylulose kinase; XK; Xylulokinase; 1-deoxy-D-xylulokinase; EC 2.7.1.17; EC 2.7.1.- from Escherichia coli
XylB / b3564: xylulokinase (EC 2.7.1.17) from Escherichia coli
xylB / GB|AAC76588.1: xylulokinase; EC 2.7.1.17 from Escherichia coli
xylB / P09099: xylulokinase (EC 2.7.1.17) from Escherichia coli

33% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory