Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT2493: ROK family transcriptional repressor, with glucokinase domain (NCBI ptt file)
is similar to:
PaperBLAST

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

37% id,
100% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

35% id,
98% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

34% id,
99% cov

More...

BT4654: ROK family transcriptional repressor, with glucokinase domain (NCBI ptt file)
is similar to:
PaperBLAST

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

37% id,
99% cov

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

36% id,
98% cov

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

34% id,
100% cov

More...

BT0370: galactokinase (NCBI ptt file)
is similar to:
PaperBLAST

B1KRG2: glucokinase (EC 2.7.1.2) from Shewanella woodyi

35% id,
98% cov

B1KDE7: glucokinase (EC 2.7.1.2) from Shewanella woodyi

32% id,
98% cov

B1KD89: glucokinase (EC 2.7.1.2) from Shewanella woodyi

33% id,
91% cov

BT3600: ROK family transcriptional repressor (NCBI ptt file)
is similar to:
PaperBLAST

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

34% id,
100% cov

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

32% id,
98% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

31% id,
98% cov

More...

BT0433: putative xylose repressor (NCBI ptt file)
is similar to:
PaperBLAST

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

29% id,
98% cov

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC 2.7.1.2 from Streptomyces coelicolor
glkA: glucokinase; EC 2.7.1.2 from Streptomyces coelicolor
P0A4E1: glucokinase (EC 2.7.1.2) from Streptomyces coelicolor

29% id,
98% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

28% id,
99% cov

More...

BT2104: ROK family member transcriptional repressor (NCBI ptt file)
is similar to:
PaperBLAST

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

25% id,
98% cov

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

25% id,
96% cov

H6UH58: glucokinase (EC 2.7.1.2) from Staphylococcus aureus

24% id,
99% cov

More...

BT2430: hexokinase type III (NCBI ptt file)
is similar to:
PaperBLAST

hxk2 / RF|NP_593865.1: hexokinase 2; EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.4; EC 2.7.1.7 from Schizosaccharomyces pombe

33% id,
63% cov

HXKG_KLULA / Q6CUZ3: Glucokinase-1; Glucose kinase 1; GLK-1; Hexokinase GLK1; EC 2.7.1.2; EC 2.7.1.1 from Kluyveromyces lactis
Q6CUZ3: glucokinase (EC 2.7.1.2) from Kluyveromyces lactis

30% id,
68% cov

hxk1 / RF|NP_592948.1: hexokinase 1; EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.4; EC 2.7.1.7 from Schizosaccharomyces pombe

33% id,
62% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory