Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)
Found 19 curated entries in PaperBLAST's database that match '2.7.1.39' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query
| BT2128: conserved hypothetical protein (NCBI ptt file) is similar to: | PaperBLAST |
CA265_RS23470: homoserine kinase (EC 2.7.1.39) from Pedobacter sp. | 28% id, 73% cov |
thrB / Q58504: homoserine kinase monomer (EC 2.7.1.39) from Methanocaldococcus jannaschii | 24% id, 63% cov |
KHSE_METMP / Q6M0H5: Homoserine kinase; HK; HSK; EC 2.7.1.39 from Methanococcus maripaludis | 25% id, 60% cov |
| BT3393: shikimate kinase (NCBI ptt file) is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 25% id, 77% cov |
| BT0474: D-glycero-D-manno-heptose 1-phosphate kinase (NCBI ptt file) is similar to: | PaperBLAST |
KHSE_ECOLI / P00547: Homoserine kinase; HK; HSK; EC 2.7.1.39 from Escherichia coli | 25% id, 68% cov |
| BT0370: galactokinase (NCBI ptt file) is similar to: | PaperBLAST |
KHSE_ARATH / Q8L7R2: Homoserine kinase; Protein DOWNY MILDEW RESISTANT 1; EC 2.7.1.39 from Arabidopsis thaliana | 25% id, 41% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory