Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 16 curated entries in PaperBLAST's database that match '2.7.1.45' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT0488: 2-dehydro-3-deoxygluconokinase (NCBI ptt file)
is similar to:
PaperBLAST

Q9WXS2: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Thermotoga maritima

56% id,
100% cov

2afbA / Q9WXS2: Crystal structure of 2-dehydro-3- deoxygluconokinase (ec 2.7.1.45) (tm0067) from thermotoga maritima at 2.05 a resolution

56% id,
98% cov

D4GSE6: 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Haloferax volcanii

35% id,
98% cov

More...

BT2803: ribokinase (NCBI ptt file)
is similar to:
PaperBLAST

RR42_RS28860: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus basilensis

28% id,
94% cov

KDGK_THET8 / Q53W83: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermus thermophilus

25% id,
87% cov

D4GSE6: 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Haloferax volcanii

23% id,
84% cov

BT1757: fructokinase (NCBI ptt file)
is similar to:
PaperBLAST

KDGK_BACSU / P50845: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Bacillus subtilis

28% id,
87% cov

BT2804: ribokinase (NCBI ptt file)
is similar to:
PaperBLAST

KDGK_THET8 / Q53W83: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermus thermophilus

25% id,
96% cov

BT2799: putative PfkB family carbohydrate kinase (NCBI ptt file)
is similar to:
PaperBLAST

KDGK_THET8 / Q53W83: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermus thermophilus

28% id,
81% cov

KDGK_BACSU / P50845: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Bacillus subtilis

26% id,
85% cov

KDGK_DICD3 / P45416: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Dickeya dadantii

26% id,
83% cov

More...

BT3576: putative ribokinase (NCBI ptt file)
is similar to:
PaperBLAST

KDGK_DICD3 / P45416: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Dickeya dadantii

26% id,
86% cov

KDGK_ECOLI / P37647: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Escherichia coli
YhjI / b3526: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178; EC 2.7.1.45) from Escherichia coli

26% id,
81% cov

KDGK_ECOLW / E0J5J4: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Escherichia coli

26% id,
81% cov

BT3305: fructokinase (NCBI ptt file)
is similar to:
PaperBLAST

KDGK_BACSU / P50845: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Bacillus subtilis

22% id,
76% cov

KDGK_THET8 / Q53W83: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermus thermophilus

23% id,
55% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory