Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 10 curated entries in PaperBLAST's database that match '2.7.1.5' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3763: rhamnulose kinase/L-fuculose kinase (NCBI ptt file)
is similar to:
PaperBLAST

RHAB_ECOLI / P32171: L-Rhamnulokinase; RhaB; RhuK; ATP:L-rhamnulose phosphotransferase; L-rhamnulose 1-kinase; Rhamnulose kinase; EC 2.7.1.5 from Escherichia coli
RhaB / b3904: rhamnulokinase (EC 2.7.1.5) from Escherichia coli
rhaB / P32171: rhamnulokinase (EC 2.7.1.5) from Escherichia coli

44% id,
97% cov

BWI76_RS00680: Rhamnulokinase (EC 2.7.1.5) from Klebsiella michiganensis

45% id,
94% cov

RHAB_ECOUT / Q1R415: Rhamnulokinase; Rhamnulose kinase; EC 2.7.1.5 from Escherichia coli

43% id,
97% cov

BT1275: L-fuculose kinase (NCBI ptt file)
is similar to:
PaperBLAST

RHAB_ECOLI / P32171: L-Rhamnulokinase; RhaB; RhuK; ATP:L-rhamnulose phosphotransferase; L-rhamnulose 1-kinase; Rhamnulose kinase; EC 2.7.1.5 from Escherichia coli
RhaB / b3904: rhamnulokinase (EC 2.7.1.5) from Escherichia coli
rhaB / P32171: rhamnulokinase (EC 2.7.1.5) from Escherichia coli

40% id,
95% cov

BWI76_RS00680: Rhamnulokinase (EC 2.7.1.5) from Klebsiella michiganensis

40% id,
94% cov

RHAB_ECOUT / Q1R415: Rhamnulokinase; Rhamnulose kinase; EC 2.7.1.5 from Escherichia coli

39% id,
95% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory