Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 6 curated entries in PaperBLAST's database that match '2.7.1.51' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT2175: hypothetical protein (NCBI ptt file)
is similar to:
PaperBLAST

BT2175: L-fuculose kinase FucK (EC 2.7.1.51); D-ribulose 1-kinase from Bacteroides thetaiotaomicron

100% id,
100% cov

BT1275: L-fuculose kinase (NCBI ptt file)
is similar to:
PaperBLAST

BT1275: L-fuculose kinase fucK (EC 2.7.1.51); D-ribulose kinase (EC 2.7.1.47) from Bacteroides thetaiotaomicron

100% id,
100% cov

FUCK_ECOLI / P11553: L-fuculokinase; L-fuculose kinase; EC 2.7.1.51 from Escherichia coli
FucK / b2803: L-fuculokinase (EC 2.7.1.51) from Escherichia coli
fucK / P11553: L-fuculokinase (EC 2.7.1.51) from Escherichia coli

28% id,
98% cov

BWI76_RS22930: L-fuculokinase (EC 2.7.1.51) from Klebsiella michiganensis

30% id,
83% cov

BT3763: rhamnulose kinase/L-fuculose kinase (NCBI ptt file)
is similar to:
PaperBLAST

BT1275: L-fuculose kinase fucK (EC 2.7.1.51); D-ribulose kinase (EC 2.7.1.47) from Bacteroides thetaiotaomicron

47% id,
99% cov

FUCK_ECOLI / P11553: L-fuculokinase; L-fuculose kinase; EC 2.7.1.51 from Escherichia coli
FucK / b2803: L-fuculokinase (EC 2.7.1.51) from Escherichia coli
fucK / P11553: L-fuculokinase (EC 2.7.1.51) from Escherichia coli

30% id,
98% cov

BWI76_RS22930: L-fuculokinase (EC 2.7.1.51) from Klebsiella michiganensis

28% id,
98% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory