Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 22 curated entries in PaperBLAST's database that match '2.7.1.59'.

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT2493: ROK family transcriptional repressor, with glucokinase domain (NCBI ptt file)
is similar to:
PaperBLAST

rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis

92% id,
100% cov

CA265_RS11300: N-acetylglucosamine kinase (EC 2.7.1.59) from Pedobacter sp.

29% id,
97% cov

NAGK_ECOLI / P75959: N-acetyl-D-glucosamine kinase; GlcNAc kinase; EC 2.7.1.59 from Escherichia coli
YcfX / b1119: N-acetyl-D-glucosamine kinase (EC 2.7.1.59) from Escherichia coli
nagK / GB|ABB62126.1: N-acetyl-D-glucosamine kinase; EC 2.7.1.59 from Escherichia coli
nagK / P75959: N-acetyl-D-glucosamine kinase (EC 2.7.1.59) from Escherichia coli

29% id,
84% cov

More...

BT4654: ROK family transcriptional repressor, with glucokinase domain (NCBI ptt file)
is similar to:
PaperBLAST

CA265_RS11300: N-acetylglucosamine kinase (EC 2.7.1.59) from Pedobacter sp.

43% id,
98% cov

rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis

32% id,
96% cov

NAGK_ECOLI / P75959: N-acetyl-D-glucosamine kinase; GlcNAc kinase; EC 2.7.1.59 from Escherichia coli
YcfX / b1119: N-acetyl-D-glucosamine kinase (EC 2.7.1.59) from Escherichia coli
nagK / GB|ABB62126.1: N-acetyl-D-glucosamine kinase; EC 2.7.1.59 from Escherichia coli
nagK / P75959: N-acetyl-D-glucosamine kinase (EC 2.7.1.59) from Escherichia coli

27% id,
99% cov

More...

BT0433: putative xylose repressor (NCBI ptt file)
is similar to:
PaperBLAST

rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis

32% id,
96% cov

CA265_RS11300: N-acetylglucosamine kinase (EC 2.7.1.59) from Pedobacter sp.

26% id,
95% cov

NAGK_ECOLI / P75959: N-acetyl-D-glucosamine kinase; GlcNAc kinase; EC 2.7.1.59 from Escherichia coli
YcfX / b1119: N-acetyl-D-glucosamine kinase (EC 2.7.1.59) from Escherichia coli
nagK / GB|ABB62126.1: N-acetyl-D-glucosamine kinase; EC 2.7.1.59 from Escherichia coli
nagK / P75959: N-acetyl-D-glucosamine kinase (EC 2.7.1.59) from Escherichia coli

24% id,
63% cov

More...

BT3600: ROK family transcriptional repressor (NCBI ptt file)
is similar to:
PaperBLAST

rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis

29% id,
96% cov

NAGK_ECOLI / P75959: N-acetyl-D-glucosamine kinase; GlcNAc kinase; EC 2.7.1.59 from Escherichia coli
YcfX / b1119: N-acetyl-D-glucosamine kinase (EC 2.7.1.59) from Escherichia coli
nagK / GB|ABB62126.1: N-acetyl-D-glucosamine kinase; EC 2.7.1.59 from Escherichia coli
nagK / P75959: N-acetyl-D-glucosamine kinase (EC 2.7.1.59) from Escherichia coli

28% id,
99% cov

NAGK_SALTY / Q8ZPZ9: N-acetyl-D-glucosamine kinase; GlcNAc kinase; EC 2.7.1.59 from Salmonella typhimurium

28% id,
99% cov

More...

BT2104: ROK family member transcriptional repressor (NCBI ptt file)
is similar to:
PaperBLAST

CA265_RS11300: N-acetylglucosamine kinase (EC 2.7.1.59) from Pedobacter sp.

27% id,
86% cov

rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis

26% id,
87% cov

BT2430: hexokinase type III (NCBI ptt file)
is similar to:
PaperBLAST

HXK1_CANAL / Q59RW5: N-acetylglucosamine kinase 1; GlcNAc kinase 1; Hexokinase 1; EC 2.7.1.59; EC 2.7.1.1 from Candida albicans

24% id,
40% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory