Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 61 curated entries in PaperBLAST's database that match '2.7.2.1'.

These curated entries have 39 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3693: acetate kinase (NCBI ptt file)
is similar to:
PaperBLAST

ACKA_THEMA / Q9WYB1: Acetate kinase; Acetokinase; EC 2.7.2.1 from Thermotoga maritima
ackA / PDB|2IIR_A: acetate kinase; EC 2.7.2.1 from Thermotoga maritima
Q9WYB1: acetate kinase (EC 2.7.2.1) from Thermotoga maritima

59% id,
99% cov

ackA / E3PRH0: acetate kinase (EC 2.7.2.15) from Acetoanaerobium sticklandii

55% id,
100% cov

P0CW05: acetate kinase (EC 2.7.2.1) from Methanosarcina mazei

54% id,
97% cov

More...

BT0704: phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file)
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15) from Escherichia coli

52% id,
96% cov

BT3395: putative acetylglutamate kinase (NCBI ptt file)
is similar to:
PaperBLAST

LYSZ_THET2 / O50147: [LysW]-aminoadipate kinase; EC 2.7.2.17 from Thermus thermophilus

34% id,
100% cov

BT3719: glutamate 5-kinase (NCBI ptt file)
is similar to:
PaperBLAST

proB: glutamate 5-kinase; EC 2.7.2.11 from Campylobacter jejuni

35% id,
90% cov

Q6E235: glutamate 5-kinase (EC 2.7.2.11) from Bacillus subtilis

33% id,
93% cov

PROB_ECOLI / P0A7B5: Glutamate 5-kinase; Gamma-glutamyl kinase; GK; EC 2.7.2.11 from Escherichia coli
ProB / b0242: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
proB: glutamate 5-kinase; EC 2.7.2.11 from Escherichia coli
proB / P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli

31% id,
95% cov

More...

BT2552: putative butyrate kinase (NCBI ptt file)
is similar to:
PaperBLAST

ackA / P71104: acetate kinase monomer (EC 2.7.2.15) from Clostridium acetobutylicum

23% id,
88% cov

ACK1 / A8J000: acetate kinase (EC 2.7.2.15) from Chlamydomonas reinhardtii

24% id,
55% cov

J9W3A6: acetate kinase (EC 2.7.2.1) from Cryptococcus neoformans

25% id,
48% cov

More...

BT3718: gamma-glutamyl phosphate reductase (NCBI ptt file)
is similar to:
PaperBLAST

P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

36% id,
56% cov

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC 1.2.1.41; EC 2.7.2.11) from Arabidopsis thaliana

35% id,
57% cov

P5CS2_ORYSJ / Q941T1: Delta-1-pyrroline-5-carboxylate synthase 2; OsP5CS2; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

33% id,
54% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory