Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 22 curated entries in PaperBLAST's database that match '2.7.2.11' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3719: glutamate 5-kinase (NCBI ptt file)
is similar to:
PaperBLAST

BT3719: glutamate 5-kinase (EC 2.7.2.11) from Bacteroides thetaiotaomicron

100% id,
100% cov

CA265_RS20855: glutamate 5-kinase (EC 2.7.2.11) from Pedobacter sp.

54% id,
99% cov

Echvi_4033: glutamate 5-kinase (EC 2.7.2.11) from Echinicola vietnamensis

50% id,
97% cov

More...

BT3718: gamma-glutamyl phosphate reductase (NCBI ptt file)
is similar to:
PaperBLAST

P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

36% id,
56% cov

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC 1.2.1.41; EC 2.7.2.11) from Arabidopsis thaliana

35% id,
57% cov

P5CS2_ORYSJ / Q941T1: Delta-1-pyrroline-5-carboxylate synthase 2; OsP5CS2; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

33% id,
54% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory