Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 38 curated entries in PaperBLAST's database that match '2.7.6.1'.

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT0748: ribose-phosphate pyrophosphokinase (NCBI ptt file)
is similar to:
PaperBLAST

Q5SHU3: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Thermus thermophilus

46% id,
98% cov

PRPS1_HUMAN / P60891: Ribose-phosphate pyrophosphokinase 1; PPRibP; Phosphoribosyl pyrophosphate synthase I; PRS-I; EC 2.7.6.1 from Homo sapiens
PRPS1_MOUSE / Q9D7G0: Ribose-phosphate pyrophosphokinase 1; Phosphoribosyl pyrophosphate synthase I; PRS-I; EC 2.7.6.1 from Mus musculus
PRPS1 / P60891: Ribose-phosphate pyrophosphokinase 1 (EC 2.7.6.1) from Homo sapiens
P60891: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Homo sapiens

47% id,
96% cov

E7EAU9: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Bacillus amyloliquefaciens

47% id,
95% cov

More...

BT3731: orotate phosphoribosyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

KPRS_THEKO / O52958: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Thermococcus kodakarensis

27% id,
51% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory