Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 74 curated entries in PaperBLAST's database that match '2.7.7.9'.

These curated entries have 52 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT1715: putative polysaccharide biosynthesis protein (NCBI ptt file)
is similar to:
PaperBLAST

BT1715 / Q8A710: 2-keto-3-deoxy-D-glycero-D-galacto-nononate cytidylyltransferase (EC 2.7.7.92) from Bacteroides thetaiotaomicron
Q8A710: 3-deoxy-D-glycero-D-galacto-nonulopyranosonate cytidylyltransferase (EC 2.7.7.92) from Bacteroides thetaiotaomicron

100% id,
100% cov

BT0379: UDP-glucose 6-dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

Q8GQP9: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Streptococcus equi

57% id,
100% cov

BT0599: UDP-glucose 6-dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

Q8GQP9: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Streptococcus equi

57% id,
100% cov

BT0745: 3-deoxy-manno-octulosonate cytidylyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

KDSB_SHEON / Q8EEA9: 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase; CMP-8-amino-3,8-dideoxy-manno-octulosonate synthase; EC 2.7.7.90 from Shewanella oneidensis
kdsB / Q8EEA9: 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.90) from Shewanella oneidensis
Q8EEA9: 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.90) from Shewanella oneidensis

47% id,
97% cov

BT1633: mannose-1-phosphate guanyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

MURU_PSEPK / Q88QT2: N-acetylmuramate alpha-1-phosphate uridylyltransferase; MurNAc-1P uridylyltransferase; MurNAc-alpha-1P uridylyltransferase; EC 2.7.7.99 from Pseudomonas putida
murU / Q88QT2: N-acetyl-α-D-muramate 1-phosphate uridylyltransferase (EC 2.7.7.99) from Pseudomonas putida
Q88QT2: N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase (EC 2.7.7.99) from Pseudomonas putida

34% id,
98% cov

MURU_CAUVC / Q9A2M1: N-acetylmuramate alpha-1-phosphate uridylyltransferase; MurNAc-1P uridylyltransferase; MurNAc-alpha-1P uridylyltransferase; EC 2.7.7.99 from Caulobacter vibrioides

30% id,
96% cov

MURU_NEIMB / Q9JXY0: N-acetylmuramate alpha-1-phosphate uridylyltransferase; MurNAc-1P uridylyltransferase; MurNAc-alpha-1P uridylyltransferase; EC 2.7.7.99 from Neisseria meningitidis

34% id,
78% cov

More...

BT0476: D-mannose-1-phosphate guanyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

MURU_PSEPK / Q88QT2: N-acetylmuramate alpha-1-phosphate uridylyltransferase; MurNAc-1P uridylyltransferase; MurNAc-alpha-1P uridylyltransferase; EC 2.7.7.99 from Pseudomonas putida
murU / Q88QT2: N-acetyl-α-D-muramate 1-phosphate uridylyltransferase (EC 2.7.7.99) from Pseudomonas putida
Q88QT2: N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase (EC 2.7.7.99) from Pseudomonas putida

27% id,
97% cov

MURU_PSEAE / Q9I5U0: N-acetylmuramate alpha-1-phosphate uridylyltransferase; MurNAc-1P uridylyltransferase; MurNAc-alpha-1P uridylyltransferase; EC 2.7.7.99 from Pseudomonas aeruginosa

29% id,
53% cov

BT1351: glucose-1-phosphate cytidylyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

MURU_NEIMB / Q9JXY0: N-acetylmuramate alpha-1-phosphate uridylyltransferase; MurNAc-1P uridylyltransferase; MurNAc-alpha-1P uridylyltransferase; EC 2.7.7.99 from Neisseria meningitidis

25% id,
100% cov

BT0463: glucose-1-phosphate thymidylyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

30% id,
81% cov

GTAB_BACSU / Q05852: UTP--glucose-1-phosphate uridylyltransferase; Alpha-D-glucosyl-1-phosphate uridylyltransferase; General stress protein 33; GSP33; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase; EC 2.7.7.9 from Bacillus subtilis

25% id,
88% cov

Q8YS18: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Nostoc sp.

25% id,
85% cov

More...

BT2017: glucose-1-phosphate thymidylyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

Q8YS18: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Nostoc sp.

26% id,
93% cov

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

27% id,
85% cov

Q8GQP8: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Streptococcus equi

24% id,
88% cov

More...

BT1721: putative glucose-1-P-cytidylyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

25% id,
79% cov

GTAB_STAA8 / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase; Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase; EC 2.7.7.9 from Staphylococcus aureus

25% id,
64% cov

GTAB_BACSU / Q05852: UTP--glucose-1-phosphate uridylyltransferase; Alpha-D-glucosyl-1-phosphate uridylyltransferase; General stress protein 33; GSP33; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase; EC 2.7.7.9 from Bacillus subtilis

38% id,
25% cov

More...

BT3755: acetyl-coenzyme A synthetase (NCBI ptt file)
is similar to:
PaperBLAST

MHAA_STRAQ / P80435: 3-hydroxy-4-methylanthranilate adenylyltransferase; 4-MHA-activating enzyme; 4-methyl-3-hydroxyanthranilic acid-AMP ligase; 4-MHA-AMP ligase; Actinomycin synthetase I; ACMS I; EC 2.7.7.97 from Streptomyces anulatus
acmA / D6R238: 3-hydroxy-4-methylanthranilate adenylyltransferase (EC 2.7.7.97) from Streptomyces anulatus

24% id,
67% cov

BT1713: putative acylneuraminate cytidylyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

Q99KK2: N-acylneuraminate cytidylyltransferase (EC 2.7.7.43); 3-deoxy-D-glycero-D-galacto-nonulopyranosonate cytidylyltransferase (EC 2.7.7.92) from Mus musculus

31% id,
35% cov

cmas / Q90WG6: 2-keto-3-deoxy-D-glycero-D-galacto-nononate cytidylyltransferase (EC 2.7.7.92) from Oncorhynchus mykiss
Q90WG6: N-acylneuraminate cytidylyltransferase (EC 2.7.7.43); 3-deoxy-D-glycero-D-galacto-nonulopyranosonate cytidylyltransferase (EC 2.7.7.92) from Oncorhynchus mykiss

25% id,
35% cov

BT1677: putative hydrolase (NCBI ptt file)
is similar to:
PaperBLAST

cmas / Q90WG6: 2-keto-3-deoxy-D-glycero-D-galacto-nononate cytidylyltransferase (EC 2.7.7.92) from Oncorhynchus mykiss
Q90WG6: N-acylneuraminate cytidylyltransferase (EC 2.7.7.43); 3-deoxy-D-glycero-D-galacto-nonulopyranosonate cytidylyltransferase (EC 2.7.7.92) from Oncorhynchus mykiss

28% id,
35% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory