Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 51 curated entries in PaperBLAST's database that match '2.7.7.9' as complete word(s).

These curated entries have 41 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT0379: UDP-glucose 6-dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

Q8GQP9: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Streptococcus equi

57% id,
100% cov

BT0599: UDP-glucose 6-dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

Q8GQP9: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Streptococcus equi

57% id,
100% cov

BT0463: glucose-1-phosphate thymidylyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

A0A0H2ZMV4: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Streptococcus pneumoniae

25% id,
98% cov

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

30% id,
81% cov

YNGB_BACSU / O31822: UTP--glucose-1-phosphate uridylyltransferase YngB; Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; UGPase; Uridine diphosphoglucose pyrophosphorylase; EC 2.7.7.9 from Bacillus subtilis

25% id,
97% cov

More...

BT2017: glucose-1-phosphate thymidylyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

Q8YS18: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Nostoc sp.

26% id,
93% cov

YNGB_BACSU / O31822: UTP--glucose-1-phosphate uridylyltransferase YngB; Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; UGPase; Uridine diphosphoglucose pyrophosphorylase; EC 2.7.7.9 from Bacillus subtilis

24% id,
96% cov

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

27% id,
85% cov

More...

BT1633: mannose-1-phosphate guanyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

25% id,
96% cov

YNGB_BACSU / O31822: UTP--glucose-1-phosphate uridylyltransferase YngB; Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; UGPase; Uridine diphosphoglucose pyrophosphorylase; EC 2.7.7.9 from Bacillus subtilis

24% id,
71% cov

A0A0H2ZMV4: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Streptococcus pneumoniae

24% id,
72% cov

More...

BT1721: putative glucose-1-P-cytidylyltransferase (NCBI ptt file)
is similar to:
PaperBLAST

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

25% id,
79% cov

GTAB_STAA8 / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase; Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase; EC 2.7.7.9 from Staphylococcus aureus

25% id,
64% cov

GTAB_BACSU / Q05852: UTP--glucose-1-phosphate uridylyltransferase; Alpha-D-glucosyl-1-phosphate uridylyltransferase; General stress protein 33; GSP33; UDP-glucose pyrophosphorylase; UDPGP; UGPase; Uridine diphosphoglucose pyrophosphorylase; EC 2.7.7.9 from Bacillus subtilis

38% id,
25% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory