Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 14 curated entries in PaperBLAST's database that match '3.2.1.48'.

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT1759: levanase precursor (2,6-beta-D-fructofuranosidase) (NCBI ptt file)
is similar to:
PaperBLAST

Pf1N1B4_5116: Sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

33% id,
95% cov

Pf6N2E2_1650: Sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

32% id,
91% cov

AO356_28590: sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

34% id,
87% cov

BT3082: 2,6-beta-D-fructofuranosidase precursor (NCBI ptt file)
is similar to:
PaperBLAST

Pf6N2E2_1650: Sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

32% id,
95% cov

Pf1N1B4_5116: Sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

32% id,
90% cov

AO356_28590: sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

32% id,
88% cov

BT1765: levanase precursor (2,6-beta-D-fructofuranosidase) (NCBI ptt file)
is similar to:
PaperBLAST

Pf1N1B4_5116: Sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

29% id,
96% cov

Pf6N2E2_1650: Sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

31% id,
82% cov

AO356_28590: sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

30% id,
80% cov

BT3698: alpha-amylase, susG (NCBI ptt file)
is similar to:
PaperBLAST

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

23% id,
58% cov

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

42% id,
25% cov

BT3704: alpha-amylase (neopullulanase) SusA (NCBI ptt file)
is similar to:
PaperBLAST

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

29% id,
42% cov

BT3299: alpha-glucosidase II (NCBI ptt file)
is similar to:
PaperBLAST

AAT18166.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)

29% id,
39% cov

SUIS_HUMAN / P14410: Sucrase-isomaltase, intestinal; EC 3.2.1.48; EC 3.2.1.10 from Homo sapiens
P14410: oligo-1,6-glucosidase (EC 3.2.1.10); sucrose alpha-glucosidase (EC 3.2.1.48) from Homo sapiens

29% id,
39% cov

AAA31459.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.20|3.2.1.48)

29% id,
39% cov

More...

BT3659: alpha-xylosidase (NCBI ptt file)
is similar to:
PaperBLAST

AAA31459.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.20|3.2.1.48)

23% id,
40% cov

SUIS_HUMAN / P14410: Sucrase-isomaltase, intestinal; EC 3.2.1.48; EC 3.2.1.10 from Homo sapiens
P14410: oligo-1,6-glucosidase (EC 3.2.1.10); sucrose alpha-glucosidase (EC 3.2.1.48) from Homo sapiens

27% id,
16% cov

AAT18166.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)

27% id,
16% cov

More...

BT3086: alpha-glucosidase II (NCBI ptt file)
is similar to:
PaperBLAST

BAA25370.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)

28% id,
17% cov

B5THE3: sucrose alpha-glucosidase (EC 3.2.1.48) from Mus musculus

30% id,
16% cov

BAA25370.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)

28% id,
17% cov

More...

BT3169: alpha-xylosidase (NCBI ptt file)
is similar to:
PaperBLAST

BAA25370.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)

25% id,
18% cov

BT0771: 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file)
is similar to:
PaperBLAST

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

35% id,
13% cov

BT0339: alpha-glucosidase (NCBI ptt file)
is similar to:
PaperBLAST

B5THE3: sucrose alpha-glucosidase (EC 3.2.1.48) from Mus musculus

26% id,
17% cov

SUIS_HUMAN / P14410: Sucrase-isomaltase, intestinal; EC 3.2.1.48; EC 3.2.1.10 from Homo sapiens
P14410: oligo-1,6-glucosidase (EC 3.2.1.10); sucrose alpha-glucosidase (EC 3.2.1.48) from Homo sapiens

24% id,
17% cov

AAT18166.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)

24% id,
17% cov

More...

BT3085: alpha-xylosidase (NCBI ptt file)
is similar to:
PaperBLAST

BAA25370.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)

25% id,
13% cov

AAA65097.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)

24% id,
12% cov

AAA31459.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.20|3.2.1.48)

24% id,
10% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

4742087-4744621 (frame -3) on 241
is similar to:
PaperBLAST

B5THE3: sucrose alpha-glucosidase (EC 3.2.1.48) from Mus musculus
Also see hits to annotated proteins above

30% id,
18% cov

AAT18166.1: sucrase-isomaltase (SI) (EC 3.2.1.10|3.2.1.48)
Also see hits to annotated proteins above

28% id,
19% cov

SUIS_HUMAN / P14410: Sucrase-isomaltase, intestinal; EC 3.2.1.48; EC 3.2.1.10 from Homo sapiens
P14410: oligo-1,6-glucosidase (EC 3.2.1.10); sucrose alpha-glucosidase (EC 3.2.1.48) from Homo sapiens
Also see hits to annotated proteins above

28% id,
19% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory