Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 45 curated entries in PaperBLAST's database that match '3.2.1.80' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT1759: levanase precursor (2,6-beta-D-fructofuranosidase) (NCBI ptt file)
is similar to:
PaperBLAST

AAO76866.1: β-fructofuranosidase (BT1759) (EC 3.2.1.26|3.2.1.64|3.2.1.80)

100% id,
100% cov

AAO76872.1: β-fructofuranosidase (BT1765) (EC 3.2.1.26|3.2.1.64|3.2.1.80)

51% id,
97% cov

AAA22924.1: β-fructanase (FruA;ScrL) (EC 3.2.1.26|3.2.1.64|3.2.1.65|3.2.1.80)

51% id,
96% cov

More...

BT3082: 2,6-beta-D-fructofuranosidase precursor (NCBI ptt file)
is similar to:
PaperBLAST

AAO78188.1: β-fructofuranosidase (BT3082;BT_3082) (EC 3.2.1.26|3.2.1.64|3.2.1.80)

100% id,
100% cov

AAO76866.1: β-fructofuranosidase (BT1759) (EC 3.2.1.26|3.2.1.64|3.2.1.80)

35% id,
98% cov

INUE_ASPNC / A2R0E0: Extracellular exo-inulinase inuE; EC 3.2.1.80 from Aspergillus niger
ABB59682.1: exo-inulinase E (InuE;Inu1;An12g08280) (EC 2.4.1.99|3.2.1.80)

36% id,
96% cov

More...

BT1765: levanase precursor (2,6-beta-D-fructofuranosidase) (NCBI ptt file)
is similar to:
PaperBLAST

AAO76872.1: β-fructofuranosidase (BT1765) (EC 3.2.1.26|3.2.1.64|3.2.1.80)

100% id,
100% cov

AAA22924.1: β-fructanase (FruA;ScrL) (EC 3.2.1.26|3.2.1.64|3.2.1.65|3.2.1.80)

75% id,
100% cov

AAO76866.1: β-fructofuranosidase (BT1759) (EC 3.2.1.26|3.2.1.64|3.2.1.80)

53% id,
85% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory