Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 17 curated entries in PaperBLAST's database that match '3.2.1.93' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3704: alpha-amylase (neopullulanase) SusA (NCBI ptt file)
is similar to:
PaperBLAST

AAV42863.1: LBA1014 (TreC;La1014) (EC 3.2.1.93)

25% id,
69% cov

ABF38825.1: MGAS10750_Spy1875 (DexS) (EC 3.2.1.93)

26% id,
62% cov

TREC_BACSU / P39795: Trehalose-6-phosphate hydrolase; Alpha,alpha-phosphotrehalase; Phospho-alpha-(1-1)-glucosidase; EC 3.2.1.93 from Bacillus subtilis
CAB12610.1: trehalose-6-phosphate hydrolase (TreA;BSU07810) (EC 3.2.1.93)
treA / P39795: trehalose-6-phosphate hydrolase (EC 3.2.1.93) from Bacillus subtilis

30% id,
32% cov

More...

BT3698: alpha-amylase, susG (NCBI ptt file)
is similar to:
PaperBLAST

AAN06917.1: trehalose-6-phosphate hydrolase (TreA) (EC 3.2.1.93)

32% id,
42% cov

AO353_15985: Alpha,alpha-phosphotrehalase (EC 3.2.1.93) from Pseudomonas fluorescens

31% id,
42% cov

PS417_23045: Alpha,alpha-phosphotrehalase (EC 3.2.1.93) from Pseudomonas simiae

32% id,
39% cov

More...

BT1663: pullulanase precursor (NCBI ptt file)
is similar to:
PaperBLAST

AAU39732.1: trehalose-6-P hydrolase (TreA;BlTreA;BLi00797;BL03069) (EC 3.2.1.93)
Q65MI2: alpha,alpha-phosphotrehalase (EC 3.2.1.93) from Bacillus licheniformis

26% id,
28% cov

BT0773: alpha-amylase 3 (NCBI ptt file)
is similar to:
PaperBLAST

AAU39732.1: trehalose-6-P hydrolase (TreA;BlTreA;BLi00797;BL03069) (EC 3.2.1.93)
Q65MI2: alpha,alpha-phosphotrehalase (EC 3.2.1.93) from Bacillus licheniformis

26% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory