Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 1 curated entries in PaperBLAST's database that match '3.5.1.20' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT0875: beta-ureidopropionase (NCBI ptt file)
is similar to:
PaperBLAST

CTU_FRATT / Q5NHL7: Citrullinase; Citrulline ureidase; CTU; EC 3.5.1.20 from Francisella tularensis

40% id,
100% cov

BT0804: putative carbon-nitrogen hydrolase (NCBI ptt file)
is similar to:
PaperBLAST

CTU_FRATT / Q5NHL7: Citrullinase; Citrulline ureidase; CTU; EC 3.5.1.20 from Francisella tularensis

26% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory