Curated BLAST for Genomes


Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 20 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3883: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (NCBI ptt file)
is similar to:

A0A0D5YDA5: fumarylacetoacetase (EC from Acinetobacter baumannii

35% id,
91% cov

A0A0M3SVN7: fumarylacetoacetase (EC from Cupriavidus gilardii

35% id,
83% cov

A0A1B0ZSC0: fumarylacetoacetase (EC from Phaeobacter gallaeciensis

31% id,
84% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory