Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)
Found 22 curated entries in PaperBLAST's database that match '4.1.1.18' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query
| BT3224: putative lysine decarboxylase (NCBI ptt file) is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 41% id, 83% cov |
| BT1374: diaminopimelate decarboxylase (NCBI ptt file) is similar to: | PaperBLAST |
A0A0H3H393: lysine decarboxylase (EC 4.1.1.18) from Klebsiella oxytoca | 32% id, 87% cov |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 20% id, 88% cov |
| BT3307: lysine decarboxylase (NCBI ptt file) is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 34% id, 73% cov |
| BT3394: putative arginine decarboxylase (NCBI ptt file) is similar to: | PaperBLAST |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 24% id, 60% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4115775-4116407 (frame +3) on 241 is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 40% id, 86% cov |
Lawrence Berkeley National Laboratory