Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 116 curated entries in PaperBLAST's database that match '4.1.2.13' as complete word(s).

These curated entries have 92 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT1106: fructose-bisphosphate aldolase class I (NCBI ptt file)
is similar to:
PaperBLAST

ALF1_ECOLI / P0A991: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 4.1.2.13 from Escherichia coli
DhnA / b2097: fructose-bisphosphate aldolase class I (EC 4.1.2.13) from Escherichia coli
fbaB / P0A991: fructose-bisphosphate aldolase class I (EC 4.1.2.13) from Escherichia coli

67% id,
99% cov

ALF1_HALS3 / B0R3Y0: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 4.1.2.13 from Halobacterium salinarum

26% id,
95% cov

DKFP_METJA / Q58980: Fructose-bisphosphate aldolase/6-deoxy-5-ketofructose 1-phosphate synthase; DKFP synthase; Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 2.2.1.11; EC 4.1.2.13 from Methanocaldococcus jannaschii
MJ1585 / Q58980: fructose 1,6-bisphosphate aldolase monomer (EC 2.2.1.11; EC 4.1.2.13) from Methanocaldococcus jannaschii

29% id,
84% cov

More...

BT1659: fructose-bisphosphate aldolase class I (NCBI ptt file)
is similar to:
PaperBLAST

ALF1_ECOLI / P0A991: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 4.1.2.13 from Escherichia coli
DhnA / b2097: fructose-bisphosphate aldolase class I (EC 4.1.2.13) from Escherichia coli
fbaB / P0A991: fructose-bisphosphate aldolase class I (EC 4.1.2.13) from Escherichia coli

66% id,
100% cov

ALF1_HALS3 / B0R3Y0: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 4.1.2.13 from Halobacterium salinarum

27% id,
87% cov

ALF1_THETK / P58315: Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; FBPA; EC 4.1.2.13 from Thermoproteus tenax

32% id,
64% cov

More...

BT1691: fructose-bisphosphate aldolase (NCBI ptt file)
is similar to:
PaperBLAST

ALF_GIAIC / A8B2U2: Fructose-bisphosphate aldolase; Glfba; glFBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Giardia intestinalis

48% id,
94% cov

ALF_THECA / Q703I2: Fructose-bisphosphate aldolase; FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; EC 4.1.2.13 from Thermus caldophilus

45% id,
98% cov

Q9RHA2: fructose-bisphosphate aldolase (EC 4.1.2.13) from Thermus aquaticus

45% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory