Curated BLAST for Genomes


Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 3 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT4702: dihydroxynapthoic acid synthetase (NCBI ptt file)
is similar to:

bamR / Q2LXU6: cyclohexa-1,5-dienecarbonyl-CoA hydratase monomer (EC from Syntrophus aciditrophicus

32% id,
98% cov

D3RXI0: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC from Ferroglobus placidus

30% id,
99% cov

O87873: cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC from Thauera aromatica

29% id,
67% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory