Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 7 curated entries in PaperBLAST's database that match '4.2.1.116'.

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT4702: dihydroxynapthoic acid synthetase (NCBI ptt file)
is similar to:
PaperBLAST

HPCD_METS5 / A4YI89: 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula
Msed_2001 / A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula
A4YI89: 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula

34% id,
99% cov

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

32% id,
99% cov

acuH / Q5LWT8: acryloyl-CoA hydratase (EC 4.2.1.116) from Ruegeria pomeroyi

32% id,
98% cov

More...

BT3771: 3-oxoacyl-[acyl-carrier protein] reductase (NCBI ptt file)
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

34% id,
26% cov

BT3232: gluconate 5-dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

31% id,
27% cov

BT1651: pyrophosphorylase (NCBI ptt file)
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

25% id,
32% cov

BT1911: 7-alpha-hydroxysteroid dehydrogenase (NCBI ptt file)
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

29% id,
26% cov

BT1433: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

37% id,
20% cov

BT0130: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

28% id,
26% cov

BT1015: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

25% id,
27% cov

BT0972: putative oxidoreductase (NCBI ptt file)
is similar to:
PaperBLAST

FOX2 / A0A1D8PJ13: D-specific enoyl-CoA hydratase (EC 4.2.1.119; EC 4.2.1.116) from Candida albicans

27% id,
21% cov

BT4704: O-succinylbenzoic acid--CoA ligase (NCBI ptt file)
is similar to:
PaperBLAST

pcs / A9WEU4: propionyl-CoA synthase subunit (EC 1.3.1.84; EC 4.2.1.116; EC 6.2.1.36) from Chloroflexus aurantiacus

31% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory