Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)
Found 53 curated entries in PaperBLAST's database that match '4.2.1.12'.
These curated entries have 33 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query
| BT0133: putative sugar phosphate isomerase (NCBI ptt file) is similar to: | PaperBLAST |
G8UQI0: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.1.126) from Tannerella forsythia | 79% id, 99% cov |
MURQ_ECOLI / P76535: N-acetylmuramic acid 6-phosphate etherase; MurNAc-6-P etherase; N-acetylmuramic acid 6-phosphate hydrolase; N-acetylmuramic acid 6-phosphate lyase; EC 4.2.1.126 from Escherichia coli | 46% id, 90% cov |
P44862: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.1.126) from Haemophilus influenzae | 50% id, 83% cov |
| BT0533: tryptophan synthase beta chain (NCBI ptt file) is similar to: | PaperBLAST |
trpB1 / P50909: β subunit of tryptophan synthase (EC 4.2.1.122) from Thermotoga maritima | 61% id, 97% cov |
trpB / Q9YGB0: tryptophan synthase β subunit (EC 4.2.1.122) from Thermococcus kodakarensis | 53% id, 98% cov |
TrpB / b1261: tryptophan synthase subunit β (EC 4.2.1.122) from Escherichia coli | 52% id, 95% cov |
| BT_4664: tryptophan synthase subunit beta (RefSeq) is similar to: | PaperBLAST |
trpB2 / Q9WZ09: tryptophan synthase β2 subunit (EC 4.2.1.122) from Thermotoga maritima | 59% id, 98% cov |
Q5JDJ1: tryptophan synthase (indole-salvaging) (EC 4.2.1.122); tryptophan synthase (subunit 1/2) (EC 4.2.1.20) from Thermococcus kodakarensis | 52% id, 97% cov |
TSBType2 / Q9FFW8: tryptophan synthase, beta subunit (EC 4.2.1.122) from Arabidopsis thaliana | 57% id, 86% cov |
| BT2078: dihydroxy-acid dehydratase (NCBI ptt file) is similar to: | PaperBLAST |
EDD_ZYMMO / P21909: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; EC 4.2.1.12 from Zymomonas mobilis | 27% id, 91% cov |
Q1PAG1: phosphogluconate dehydratase (EC 4.2.1.12) from Pseudomonas chlororaphis | 32% id, 53% cov |
EDD_ECOLI / P0ADF6: Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; Entner-Doudoroff dehydrase; EC 4.2.1.12 from Escherichia coli | 30% id, 52% cov |
| BT0527: tryptophan synthase alpha chain (NCBI ptt file) is similar to: | PaperBLAST |
A0A2U8JPY3: tryptophan synthase (indole-salvaging) (EC 4.2.1.122); tryptophan synthase (EC 4.2.1.20) from Psilocybe cubensis | 33% id, 36% cov |
| BT0554: glucosamine--fructose-6-phosphate aminotransferase (NCBI ptt file) is similar to: | PaperBLAST |
P44862: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.1.126) from Haemophilus influenzae | 26% id, 41% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory