Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 20 curated entries in PaperBLAST's database that match '4.2.1.91' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3936: prephenate dehydratase (NCBI ptt file)
is similar to:
PaperBLAST

AROD2_ARATH / Q9SSE7: Arogenate dehydratase/prephenate dehydratase 2, chloroplastic; AtADT2; AtPDT2; EC 4.2.1.51; EC 4.2.1.91 from Arabidopsis thaliana
Q9SSE7: arogenate dehydratase (EC 4.2.1.91) from Arabidopsis thaliana

33% id,
72% cov

AROD3_PETHY / D3U717: Arogenate dehydratase 3; PhADT3; Prephenate dehydratase ADT3; EC 4.2.1.91; EC 4.2.1.51 from Petunia hybrida
D3U717: arogenate dehydratase (EC 4.2.1.91) from Petunia x

36% id,
65% cov

AROD1_PETHY / D3U715: Arogenate dehydratase 1; PhADT1; EC 4.2.1.91 from Petunia hybrida
D3U715: arogenate dehydratase (EC 4.2.1.91) from Petunia x

35% id,
66% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory