Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)
Found 50 curated entries in PaperBLAST's database that match '4.3.1.17' as complete word(s).
These curated entries have 35 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query
| BT4678: L-serine dehydratase (NCBI ptt file) is similar to: | PaperBLAST |
Ac3H11_929: L-serine ammonia-lyase (EC 4.3.1.17) from Acidovorax sp. | 42% id, 98% cov |
SDHM_ECOLI / P30744: L-serine dehydratase 2; SDH 2; L-serine deaminase 2; L-SD2; EC 4.3.1.17 from Escherichia coli | 41% id, 98% cov |
Pf1N1B4_1013: L-serine ammonia-lyase (EC 4.3.1.17) from Pseudomonas fluorescens | 39% id, 99% cov |
| BT1852: cysteine synthase A (NCBI ptt file) is similar to: | PaperBLAST |
TSAL_GEOSL / Q74FW6: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine/serine ammonia-lyase; EC 4.3.1.19; EC 4.3.1.17 from Geobacter sulfurreducens | 28% id, 74% cov |
SRR_ORYSJ / Q7XSN8: Serine racemase; D-serine dehydratase; D-serine ammonia-lyase; L-serine dehydratase; L-serine ammonia-lyase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Oryza sativa | 24% id, 83% cov |
SRR_ARATH / Q2PGG3: Serine racemase; AtSR; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 4.3.1.17; EC 4.3.1.18; EC 5.1.1.18 from Arabidopsis thaliana | 22% id, 85% cov |
| BT0533: tryptophan synthase beta chain (NCBI ptt file) is similar to: | PaperBLAST |
TSAL_GEOSL / Q74FW6: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine/serine ammonia-lyase; EC 4.3.1.19; EC 4.3.1.17 from Geobacter sulfurreducens | 25% id, 75% cov |
B1N2N4: L-serine ammonia-lyase (EC 4.3.1.17) from Entamoeba histolytica | 30% id, 26% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory