Curated BLAST for Genomes


Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 23 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT2690: histidine ammonia-lyase (NCBI ptt file)
is similar to:

Sama_1631: Histidine ammonia-lyase (EC from Shewanella amazonensis

46% id,
98% cov

CA265_RS22270: Histidine ammonia-lyase (EC from Pedobacter sp.

44% id,
97% cov

BPHYT_RS07555: Histidine ammonia-lyase (EC from Burkholderia phytofirmans

44% id,
93% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory