Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 19 curated entries in PaperBLAST's database that match '4.3.2.1' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3733: argininosuccinate lyase (NCBI ptt file)
is similar to:
PaperBLAST

BT3733: arginosuccinate lyase (EC 4.3.2.1) from Bacteroides thetaiotaomicron

100% id,
100% cov

CA265_RS18485: arginosuccinate lyase (EC 4.3.2.1) from Pedobacter sp.

61% id,
100% cov

Echvi_3852: arginosuccinate lyase (EC 4.3.2.1) from Echinicola vietnamensis

59% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory