Curated BLAST for Genomes


Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 38 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT1580: lactoylglutathione lyase (NCBI ptt file)
is similar to:

Q9HY85: lactoylglutathione lyase (EC from Pseudomonas aeruginosa

32% id,
99% cov

P0A0T3: lactoylglutathione lyase (EC from Neisseria meningitidis

33% id,
92% cov

Q68RJ8: lactoylglutathione lyase (EC from Leishmania major

30% id,
86% cov


BT1685: lactoylglutathione lyase and related protein (NCBI ptt file)
is similar to:

Q97H22: lactoylglutathione lyase (EC from Clostridium acetobutylicum

30% id,
98% cov

BT3922: putative ThiJ family intracellular protease/amidase (NCBI ptt file)
is similar to:

DJ1D_ARATH / Q9M8R4: Protein DJ-1 homolog D; AtDJ1D; Lactoylglutathione lyase DJ1D; EC from Arabidopsis thaliana

28% id,
48% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory