Curated BLAST for Genomes


Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 12 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT1685: lactoylglutathione lyase and related protein (NCBI ptt file)
is similar to:

MCE_PYRHO / O58010: Methylmalonyl-CoA epimerase; DL-methylmalonyl-CoA racemase; EC from Pyrococcus horikoshii

54% id,
96% cov

Msed_0639 / A4YEG2: methylmalonyl-CoA epimerase monomer (EC from Metallosphaera sedula
A4YEG2: methylmalonyl-CoA epimerase (EC from Metallosphaera sedula

41% id,
99% cov

mcee / A9WGS0: methylmalonyl-CoA epimerase (EC from Chloroflexus aurantiacus

32% id,
93% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory