Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 193 curated entries in PaperBLAST's database that match '6.2.1.1'.

These curated entries have 146 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT2782: long-chain-fatty-acid--CoA ligase (NCBI ptt file)
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

44% id,
95% cov

F1CYZ6: 4-coumarate-CoA ligase (EC 6.2.1.12) from Acetobacterium woodii

36% id,
98% cov

HBCL2_METS5 / A4YDR9: 4-hydroxybutyrate--CoA ligase 2; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; acyl-activating enzyme; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

30% id,
93% cov

More...

BT2924: acetyl-CoA synthetase (NCBI ptt file)
is similar to:
PaperBLAST

ACDB1_PYRFU / E7FHP1: Acetate--CoA ligase [ADP-forming] I subunit beta; ADP-forming acetyl coenzyme A synthetase I subunit beta; ACS I subunit beta; EC 6.2.1.13 from Pyrococcus furiosus
acdB / E7FHP1: acetate-CoA ligase β subunit (EC 6.2.1.13) from Pyrococcus furiosus

43% id,
98% cov

ACD1_ARCFU / O29057: Acetate--CoA ligase [ADP-forming] I; ADP-forming acetyl coenzyme A synthetase I; ACS I; EC 6.2.1.13 from Archaeoglobus fulgidus

33% id,
99% cov

ACDA2_PYRFU / Q8U3D6: Acetate--CoA ligase [ADP-forming] II subunit alpha; ADP-forming acetyl coenzyme A synthetase II subunit alpha; ACS II subunit alpha; EC 6.2.1.13 from Pyrococcus furiosus

36% id,
90% cov

More...

BT3755: acetyl-coenzyme A synthetase (NCBI ptt file)
is similar to:
PaperBLAST

ACSM3_HUMAN / Q53FZ2: Acyl-coenzyme A synthetase ACSM3, mitochondrial; Acyl-CoA synthetase medium-chain family member 3; Butyrate--CoA ligase 3; Butyryl-coenzyme A synthetase 3; Middle-chain acyl-CoA synthetase 3; Propionate--CoA ligase; Protein SA homolog; EC 6.2.1.2; EC 6.2.1.17 from Homo sapiens

40% id,
94% cov

ACSM3_MOUSE / Q3UNX5: Acyl-coenzyme A synthetase ACSM3, mitochondrial; Acyl-CoA synthetase medium-chain family member 3; Butyrate--CoA ligase 3; Butyryl-coenzyme A synthetase 3; Middle-chain acyl-CoA synthetase 3; Propionate--CoA ligase; Protein SA homolog; EC 6.2.1.2; EC 6.2.1.17 from Mus musculus

39% id,
95% cov

HBCL1_METS5 / A4YDT1: 4-hydroxybutyrate--CoA ligase 1; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

40% id,
91% cov

More...

BT0787: succinyl-CoA synthetase alpha chain (NCBI ptt file)
is similar to:
PaperBLAST

ccsB / Q75VW6: citryl-CoA synthetase small subunit (EC 6.2.1.18) from Hydrogenobacter thermophilus
Q75VW6: citrate-CoA ligase (EC 6.2.1.18) from Hydrogenobacter thermophilus

38% id,
86% cov

ACD1_ARCFU / O29057: Acetate--CoA ligase [ADP-forming] I; ADP-forming acetyl coenzyme A synthetase I; ACS I; EC 6.2.1.13 from Archaeoglobus fulgidus

27% id,
32% cov

C4LUV9: acetate-CoA ligase (ADP-forming) (EC 6.2.1.13) from Entamoeba histolytica

23% id,
29% cov

More...

BT3550: putative long-chain-fatty-acid--CoA ligase (NCBI ptt file)
is similar to:
PaperBLAST

ACBG2_HUMAN / Q5FVE4: Long-chain-fatty-acid--CoA ligase ACSBG2; Acyl-CoA synthetase bubblegum family member 2; Arachidonate--CoA ligase ACSBG2; Bubblegum-related protein; PRTD-NY3; EC 6.2.1.3; EC 6.2.1.15 from Homo sapiens

29% id,
91% cov

ACSL5_RAT / O88813: Long-chain-fatty-acid--CoA ligase 5; Arachidonate--CoA ligase; Long-chain acyl-CoA synthetase 5; LACS 5; EC 6.2.1.3; EC 6.2.1.15 from Rattus norvegicus

29% id,
86% cov

ACSL5_HUMAN / Q9ULC5: Long-chain-fatty-acid--CoA ligase 5; Arachidonate--CoA ligase; Long-chain acyl-CoA synthetase 5; LACS 5; EC 6.2.1.3; EC 6.2.1.15 from Homo sapiens

29% id,
86% cov

More...

BT0788: succinyl-CoA synthetase beta chain (NCBI ptt file)
is similar to:
PaperBLAST

ccsA / Q75VW8: citryl-CoA synthetase large subunit (EC 6.2.1.18) from Hydrogenobacter thermophilus
Q75VW8: citrate-CoA ligase (EC 6.2.1.18) from Hydrogenobacter thermophilus

33% id,
79% cov

BT2154: putative long-chain-fatty-acid--CoA ligase (NCBI ptt file)
is similar to:
PaperBLAST

CCL1_HUMLU / M4ISH0: 4-coumarate--CoA ligase CCL1; HlCCL1; EC 6.2.1.12 from Humulus lupulus

26% id,
95% cov

U3MJP5: 4-coumarate-CoA ligase (EC 6.2.1.12) from Pueraria montana

26% id,
92% cov

D5LNB5: 4-coumarate-CoA ligase (EC 6.2.1.12) from Sorbus aucuparia

25% id,
94% cov

More...

BT0684: putative long-chain-fatty-acid--CoA ligase (NCBI ptt file)
is similar to:
PaperBLAST

4CL2_ARATH / Q9S725: 4-coumarate--CoA ligase 2; 4CL 2; 4-coumarate--CoA ligase isoform 2; At4CL2; 4-coumaroyl-CoA synthase 2; Caffeate--CoA ligase; EC 6.2.1.12; EC 6.2.1.- from Arabidopsis thaliana
4CL2 / Q9S725: 4-coumarate coenzyme A ligase 2 (EC 6.2.1.12) from Arabidopsis thaliana
Q9S725: 4-coumarate-CoA ligase (EC 6.2.1.12) from Arabidopsis thaliana

27% id,
88% cov

4CLL1_ARATH / Q9LQ12: 4-coumarate--CoA ligase-like 1; 4-coumarate--CoA ligase isoform 10; At4CL10; EC 6.2.1.12 from Arabidopsis thaliana

25% id,
93% cov

4CL4_ARATH / Q9LU36: 4-coumarate--CoA ligase 4; 4CL 4; (E)-ferulate--CoA ligase; 4-coumarate--CoA ligase isoform 5; At4CL5; 4-coumaroyl-CoA synthase 4; Sinapate--CoA ligase; EC 6.2.1.12; EC 6.2.1.34; EC 6.2.1.- from Arabidopsis thaliana
Q9LU36: 4-coumarate-CoA ligase (EC 6.2.1.12) from Arabidopsis thaliana

25% id,
90% cov

More...

BT1226: putative long-chain-fatty-acid--CoA ligase (NCBI ptt file)
is similar to:
PaperBLAST

ACSL5_RAT / O88813: Long-chain-fatty-acid--CoA ligase 5; Arachidonate--CoA ligase; Long-chain acyl-CoA synthetase 5; LACS 5; EC 6.2.1.3; EC 6.2.1.15 from Rattus norvegicus

28% id,
82% cov

4CL1_NARPS / A0A2H5AIX5: 4-coumarate-CoA ligase 1; EC 6.2.1.12 from Narcissus pseudonarcissus

25% id,
92% cov

L7Z3F8: 4-coumarate-CoA ligase (EC 6.2.1.12) from Lonicera japonica

26% id,
90% cov

More...

BT4704: O-succinylbenzoic acid--CoA ligase (NCBI ptt file)
is similar to:
PaperBLAST

HBCL2_METS5 / A4YDR9: 4-hydroxybutyrate--CoA ligase 2; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; acyl-activating enzyme; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17 from Metallosphaera sedula

30% id,
23% cov

ACSA_MYCTU / P9WQD1: Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 from Mycobacterium tuberculosis

30% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory