Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)
Found 6 curated entries in PaperBLAST's database that match '2-oxoacid:ferredoxin oxidoreductase%subunit beta' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query
| BT2837: 2-oxoglutarate synthase subunit korB (NCBI ptt file) is similar to: | PaperBLAST |
OFOB1_SULTO / Q96Y68: 2-oxoacid:ferredoxin oxidoreductase 1, subunit beta; OFOR1; EC 1.2.7.11 from Sulfurisphaera tokodaii | 46% id, 68% cov |
OFOB_SULSP / P72579: 2-oxoacid:ferredoxin oxidoreductase subunit beta; OFOR; EC 1.2.7.11 from Sulfolobus sp. | 46% id, 68% cov |
OFOB2_AERPE / Q9YBX8: 2-oxoacid:ferredoxin oxidoreductase 2, subunit beta; OFOR2; EC 1.2.7.11 from Aeropyrum pernix | 39% id, 80% cov |
| BT0330: ketoisovalerate oxidoreductase subunit vorA (NCBI ptt file) is similar to: | PaperBLAST |
OFOB2_SULTO / Q96XT4: 2-oxoacid:ferredoxin oxidoreductase 2, subunit beta; OFOR2; EC 1.2.7.11 from Sulfurisphaera tokodaii | 30% id, 68% cov |
OFOB2_AERPE / Q9YBX8: 2-oxoacid:ferredoxin oxidoreductase 2, subunit beta; OFOR2; EC 1.2.7.11 from Aeropyrum pernix | 29% id, 66% cov |
OFOB1_SULTO / Q96Y68: 2-oxoacid:ferredoxin oxidoreductase 1, subunit beta; OFOR1; EC 1.2.7.11 from Sulfurisphaera tokodaii | 27% id, 69% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 396038-396811 (frame -3) on 241 is similar to: | PaperBLAST |
OFOB2_SULTO / Q96XT4: 2-oxoacid:ferredoxin oxidoreductase 2, subunit beta; OFOR2; EC 1.2.7.11 from Sulfurisphaera tokodaii | 30% id, 70% cov |
Lawrence Berkeley National Laboratory