Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)
Found 4 curated entries in PaperBLAST's database that match '3-isopropylmalate dehydratase%LeuD' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query
BT1859: 3-isopropylmalate dehydratase small subunit (NCBI ptt file) is similar to: | PaperBLAST |
LeuD / b0071: 3-isopropylmalate dehydratase subunit LeuD (EC 4.2.1.33) from Escherichia coli | 46% id, 97% cov |
DVU2983: 3-isopropylmalate dehydratase / (R)-citramalate isomerase, small subunit LeuD (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 39% id, 74% cov |
2pkpA / Q58667: Crystal structure of 3-isopropylmalate dehydratase (leud)from methhanocaldococcus jannaschii dsm2661 (mj1271) | 32% id, 71% cov |
BT2072: aconitate hydratase (NCBI ptt file) is similar to: | PaperBLAST |
DVU2983: 3-isopropylmalate dehydratase / (R)-citramalate isomerase, small subunit LeuD (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 41% id, 44% cov |
2pkpA / Q58667: Crystal structure of 3-isopropylmalate dehydratase (leud)from methhanocaldococcus jannaschii dsm2661 (mj1271) | 35% id, 41% cov |
LeuD / b0071: 3-isopropylmalate dehydratase subunit LeuD (EC 4.2.1.33) from Escherichia coli | 39% id, 30% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory