Curated BLAST for Genomes


Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 3 curated entries in PaperBLAST's database that match 'N-succinylcitrulline desuccinylase' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3549: acetylornithine deacetylase (NCBI ptt file)
is similar to:

BT3549: N-succinylcitrulline desuccinylase (EC 3.5.1.-) from Bacteroides thetaiotaomicron

100% id,
100% cov

CA265_RS18500: N-succinylcitrulline desuccinylase (EC 3.5.1.-) from Pedobacter sp.

51% id,
98% cov

Echvi_3851: N-succinylcitrulline desuccinylase (EC 3.5.1.-) from Echinicola vietnamensis

51% id,
95% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory