Curated BLAST for Genomes

 

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 2 curated entries in PaperBLAST's database that match 'acetohydroxy acid synthase%large' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT2077: acetolactate synthase large subunit (NCBI ptt file)
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

43% id,
97% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

41% id,
93% cov

BT1822: pyruvate dehydrogenase [cytochrome] (NCBI ptt file)
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

36% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory