Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Bacteroides thetaiotaomicron VPI-5482 (Btheta)

Found 29 curated entries in PaperBLAST's database that match 'sorbitol dehydrogenase' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Bacteroides thetaiotaomicron VPI-5482, or try another query

BT3771: 3-oxoacyl-[acyl-carrier protein] reductase (NCBI ptt file) is similar to:	PaperBLAST
GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum	38% id, 98% cov
PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae	36% id, 100% cov
SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides	34% id, 98% cov
Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens	33% id, 98% cov
BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans	33% id, 97% cov
PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens	32% id, 100% cov
6pejA / Q92N06: Structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol	32% id, 98% cov
5jo9A / Q89FN7: Structural characterization of the thermostable bradyrhizobium japonicum d-sorbitol dehydrogenase	27% id, 92% cov
More...

BT1911: 7-alpha-hydroxysteroid dehydrogenase (NCBI ptt file) is similar to:	PaperBLAST
BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans	36% id, 97% cov
SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides	34% id, 98% cov
GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum	34% id, 98% cov
6pejA / Q92N06: Structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol	34% id, 98% cov
Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens	33% id, 98% cov
PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae	33% id, 98% cov
PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens	32% id, 98% cov
5jo9A / Q89FN7: Structural characterization of the thermostable bradyrhizobium japonicum d-sorbitol dehydrogenase	26% id, 95% cov
More...

BT3232: gluconate 5-dehydrogenase (NCBI ptt file) is similar to:	PaperBLAST
SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides	35% id, 98% cov
GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum	34% id, 98% cov
PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens	34% id, 97% cov
6pejA / Q92N06: Structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol	32% id, 97% cov
BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans	31% id, 97% cov
PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae	31% id, 97% cov
More...

BT0130: putative oxidoreductase (NCBI ptt file) is similar to:	PaperBLAST
GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum	31% id, 98% cov
PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens	30% id, 97% cov
BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans	29% id, 97% cov

BT0409: putative short-chain dehydrogenase (NCBI ptt file) is similar to:	PaperBLAST
BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans	32% id, 95% cov
GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum	30% id, 97% cov
PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens	29% id, 97% cov
6pejA / Q92N06: Structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol	27% id, 97% cov
PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae	27% id, 97% cov
SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides	31% id, 72% cov
Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens	29% id, 72% cov
More...

BT1433: putative oxidoreductase (NCBI ptt file) is similar to:	PaperBLAST
GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum	30% id, 98% cov

BT3617: sorbitol dehydrogenase (NCBI ptt file) is similar to:	PaperBLAST
DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis gutB / AAA22508.1: sorbitol dehydrogenase from Bacillus subtilis	30% id, 97% cov
HSERO_RS17015: sorbitol dehydrogenase (EC 1.1.1.14); xylitol dehydrogenase (EC 1.1.1.9) from Herbaspirillum seropedicae	29% id, 99% cov
DHSO_ARATH / Q9FJ95: Sorbitol dehydrogenase; SDH; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.56; EC 1.1.1.9 from Arabidopsis thaliana	30% id, 91% cov
xdh1 / Q876R2: D-sorbitol dehydrogenase (EC 1.1.1.14; EC 1.1.1.9) from Hypocrea jecorina	29% id, 94% cov
1e3jA / O96496: Ketose reductase (sorbitol dehydrogenase) from silverleaf whitefly	28% id, 98% cov
NAD-SDH / Q9ZR22: D-sorbitol dehydrogenase (EC 1.1.1.14) from Malus domestica	29% id, 92% cov
DHSO_SCHPO / P36624: Sorbitol dehydrogenase; SDH; Polyol dehydrogenase; Protein tms1; EC 1.1.1.- from Schizosaccharomyces pombe	29% id, 90% cov
3qe3A / P07846: Sheep liver sorbitol dehydrogenase	26% id, 97% cov
DHSO_HUMAN / Q00796: Sorbitol dehydrogenase; SDH; (R,R)-butanediol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.4; EC 1.1.1.14; EC 1.1.1.56; EC 1.1.1.9 from Homo sapiens	27% id, 93% cov
DHSO_SHEEP / P07846: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Ovis aries	26% id, 95% cov
DHSO_BOVIN / Q58D31: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bos taurus	26% id, 95% cov
DHSO_CHICK / P0DMQ6: Sorbitol dehydrogenase; SDH; Polyol dehydrogenase; EC 1.1.1.- from Gallus gallus	27% id, 92% cov
DHSO_RAT / P27867: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Rattus norvegicus	25% id, 95% cov
DHSO_MOUSE / Q64442: Sorbitol dehydrogenase; SDH; SORD; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Mus musculus	25% id, 95% cov
More...

BT4512: putative zinc-type alcohol dehydrogenase (NCBI ptt file) is similar to:	PaperBLAST
xdh1 / Q876R2: D-sorbitol dehydrogenase (EC 1.1.1.14; EC 1.1.1.9) from Hypocrea jecorina	26% id, 96% cov
DHSO_ARATH / Q9FJ95: Sorbitol dehydrogenase; SDH; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.56; EC 1.1.1.9 from Arabidopsis thaliana	29% id, 88% cov
NAD-SDH / Q9ZR22: D-sorbitol dehydrogenase (EC 1.1.1.14) from Malus domestica	29% id, 85% cov
DHSO_HUMAN / Q00796: Sorbitol dehydrogenase; SDH; (R,R)-butanediol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.4; EC 1.1.1.14; EC 1.1.1.56; EC 1.1.1.9 from Homo sapiens	26% id, 96% cov
DHSO_CHICK / P0DMQ6: Sorbitol dehydrogenase; SDH; Polyol dehydrogenase; EC 1.1.1.- from Gallus gallus	24% id, 98% cov
More...

BT4424: sorbitol dehydrogenase (NCBI ptt file) is similar to:	PaperBLAST
DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis gutB / AAA22508.1: sorbitol dehydrogenase from Bacillus subtilis	26% id, 97% cov
NAD-SDH / Q9ZR22: D-sorbitol dehydrogenase (EC 1.1.1.14) from Malus domestica	25% id, 87% cov
xdh1 / Q876R2: D-sorbitol dehydrogenase (EC 1.1.1.14; EC 1.1.1.9) from Hypocrea jecorina	26% id, 61% cov
DHSO_CHICK / P0DMQ6: Sorbitol dehydrogenase; SDH; Polyol dehydrogenase; EC 1.1.1.- from Gallus gallus	26% id, 58% cov
DHSO_ARATH / Q9FJ95: Sorbitol dehydrogenase; SDH; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.56; EC 1.1.1.9 from Arabidopsis thaliana	25% id, 56% cov
More...

BT0972: putative oxidoreductase (NCBI ptt file) is similar to:	PaperBLAST
GDH_AGRFC / A9CES4: Galactitol 2-dehydrogenase; GDH; Sorbitol dehydrogenase; SorbD; EC 1.1.1.16; EC 1.1.1.- from Agrobacterium fabrum	31% id, 71% cov
SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides	27% id, 81% cov
PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens	31% id, 68% cov
PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae	25% id, 83% cov
BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans	28% id, 72% cov
6pejA / Q92N06: Structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol	28% id, 70% cov
Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens	27% id, 70% cov
More...

BT2188: putative oxidoreductase (NCBI ptt file) is similar to:	PaperBLAST
BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans	27% id, 72% cov

BT1651: pyrophosphorylase (NCBI ptt file) is similar to:	PaperBLAST
5jo9A / Q89FN7: Structural characterization of the thermostable bradyrhizobium japonicum d-sorbitol dehydrogenase	24% id, 75% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

5928744-5929874 (frame +3) on 241 is similar to:	PaperBLAST
xdh1 / Q876R2: D-sorbitol dehydrogenase (EC 1.1.1.14; EC 1.1.1.9) from Hypocrea jecorina Also see hits to annotated proteins above	26% id, 99% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory