Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 24 curated entries in PaperBLAST's database that match '1.1.1.17' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_01519: fructuronate reductase
is similar to:
PaperBLAST

MTLD_ASPFU / Q4X1A4: Mannitol-1-phosphate 5-dehydrogenase; M1PDH; MPD; MPDH; EC 1.1.1.17 from Aspergillus fumigatus
Q4X1A4: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Aspergillus fumigatus

24% id,
75% cov

Q5B0F5: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Aspergillus nidulans

23% id,
69% cov

MTLD_ASPNG / Q8NJJ1: Mannitol-1-phosphate 5-dehydrogenase; M1PDH; MPD; MPDH; EC 1.1.1.17 from Aspergillus niger

22% id,
65% cov

H281DRAFT_02952: fructuronate reductase
is similar to:
PaperBLAST

I3E3X0: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) from Bacillus methanolicus

24% id,
52% cov

D0C7J2: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baumannii

26% id,
27% cov

H281DRAFT_04156: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
is similar to:
PaperBLAST

D0C7J2: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baumannii

27% id,
29% cov

H281DRAFT_03167: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
is similar to:
PaperBLAST

D0C7J2: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baumannii

26% id,
30% cov

H281DRAFT_04231: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
is similar to:
PaperBLAST

D0C7J2: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baumannii

27% id,
25% cov

H281DRAFT_05716: phosphoglycolate phosphatase
is similar to:
PaperBLAST

Q6FBP5: mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17); mannitol-1-phosphatase (EC 3.1.3.22) from Acinetobacter baylyi

25% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory