Curated BLAST
Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)
Found 13 curated entries in PaperBLAST's database that match '1.1.1.203' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query
H281DRAFT_05321: uronate dehydrogenase is similar to: | PaperBLAST |
URODH_PSEPK / Q88NN6: Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Pseudomonas putida PP_1171: Uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas putida Q88NN6: uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas putida | 56% id, 99% cov |
URODH_PSESM / Q888H1: Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Pseudomonas syringae udh / Q888H1: uronic acid dehydrogenase subunit (EC 1.1.1.203) from Pseudomonas syringae Q888H1: uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas syringae | 52% id, 98% cov |
Pf1N1B4_4511: D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas fluorescens | 52% id, 98% cov |
HSERO_RS23040: D-galacturonate dehydrogenase (EC 1.1.1.203) from Herbaspirillum seropedicae | 51% id, 99% cov |
PS417_17360: D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas simiae | 52% id, 96% cov |
URODH_AGRFC / Q7CRQ0: Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Agrobacterium fabrum udh / Q7CRQ0: D-uronate dehydrogenase moomer (EC 1.1.1.203) from Agrobacterium fabrum Q7CRQ0: uronate dehydrogenase (EC 1.1.1.203) from Agrobacterium tumefaciens | 48% id, 97% cov |
D6Y7Y8: uronate dehydrogenase (EC 1.1.1.203) from Thermobispora bispora | 43% id, 96% cov |
More... |
H281DRAFT_03826: uronate dehydrogenase is similar to: | PaperBLAST |
URODH_PSEPK / Q88NN6: Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Pseudomonas putida PP_1171: Uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas putida Q88NN6: uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas putida | 55% id, 99% cov |
Pf1N1B4_4511: D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas fluorescens | 54% id, 98% cov |
PS417_17360: D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas simiae | 53% id, 99% cov |
URODH_PSESM / Q888H1: Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Pseudomonas syringae udh / Q888H1: uronic acid dehydrogenase subunit (EC 1.1.1.203) from Pseudomonas syringae Q888H1: uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas syringae | 54% id, 96% cov |
URODH_AGRFC / Q7CRQ0: Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Agrobacterium fabrum udh / Q7CRQ0: D-uronate dehydrogenase moomer (EC 1.1.1.203) from Agrobacterium fabrum Q7CRQ0: uronate dehydrogenase (EC 1.1.1.203) from Agrobacterium tumefaciens | 50% id, 100% cov |
HSERO_RS23040: D-galacturonate dehydrogenase (EC 1.1.1.203) from Herbaspirillum seropedicae | 51% id, 94% cov |
D6Y7Y8: uronate dehydrogenase (EC 1.1.1.203) from Thermobispora bispora | 43% id, 94% cov |
More... |
H281DRAFT_05310: uronate dehydrogenase is similar to: | PaperBLAST |
URODH_AGRFC / Q7CRQ0: Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Agrobacterium fabrum udh / Q7CRQ0: D-uronate dehydrogenase moomer (EC 1.1.1.203) from Agrobacterium fabrum Q7CRQ0: uronate dehydrogenase (EC 1.1.1.203) from Agrobacterium tumefaciens | 48% id, 97% cov |
URODH_PSEPK / Q88NN6: Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Pseudomonas putida PP_1171: Uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas putida Q88NN6: uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas putida | 43% id, 96% cov |
URODH_PSESM / Q888H1: Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Pseudomonas syringae udh / Q888H1: uronic acid dehydrogenase subunit (EC 1.1.1.203) from Pseudomonas syringae Q888H1: uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas syringae | 43% id, 94% cov |
Pf1N1B4_4511: D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas fluorescens | 41% id, 96% cov |
D6Y7Y8: uronate dehydrogenase (EC 1.1.1.203) from Thermobispora bispora | 39% id, 99% cov |
HSERO_RS23040: D-galacturonate dehydrogenase (EC 1.1.1.203) from Herbaspirillum seropedicae | 42% id, 92% cov |
PS417_17360: D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas simiae | 40% id, 93% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory