Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)
Found 10 curated entries in PaperBLAST's database that match '1.1.1.282' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query
| H281DRAFT_03216: shikimate dehydrogenase (EC 1.1.1.25) is similar to: | PaperBLAST |
Q88K85: shikimate dehydrogenase (EC 1.1.1.25); quinate/shikimate dehydrogenase (EC 1.1.1.282) from Pseudomonas putida | 59% id, 99% cov |
A4QB65: shikimate dehydrogenase (EC 1.1.1.25); quinate/shikimate dehydrogenase (EC 1.1.1.282) from Corynebacterium glutamicum | 50% id, 99% cov |
Q9X5C9: quinate dehydrogenase (EC 1.1.1.24); quinate/shikimate dehydrogenase (EC 1.1.1.282) from Corynebacterium glutamicum | 50% id, 99% cov |
| H281DRAFT_02529: shikimate dehydrogenase is similar to: | PaperBLAST |
Q88JP1: shikimate dehydrogenase (EC 1.1.1.25); quinate/shikimate dehydrogenase (EC 1.1.1.282) from Pseudomonas putida | 36% id, 97% cov |
YDIB_ECOLI / P0A6D5: Quinate/shikimate dehydrogenase; NAD-dependent shikimate 5-dehydrogenase; EC 1.1.1.282 from Escherichia coli | 29% id, 91% cov |
Q88K85: shikimate dehydrogenase (EC 1.1.1.25); quinate/shikimate dehydrogenase (EC 1.1.1.282) from Pseudomonas putida | 32% id, 72% cov |
| H281DRAFT_06291: shikimate dehydrogenase (EC 1.1.1.25) is similar to: | PaperBLAST |
A4QB65: shikimate dehydrogenase (EC 1.1.1.25); quinate/shikimate dehydrogenase (EC 1.1.1.282) from Corynebacterium glutamicum | 29% id, 94% cov |
Q9X5C9: quinate dehydrogenase (EC 1.1.1.24); quinate/shikimate dehydrogenase (EC 1.1.1.282) from Corynebacterium glutamicum | 28% id, 94% cov |
Q88K85: shikimate dehydrogenase (EC 1.1.1.25); quinate/shikimate dehydrogenase (EC 1.1.1.282) from Pseudomonas putida | 26% id, 97% cov |
| H281DRAFT_01679: shikimate dehydrogenase (EC 1.1.1.25) is similar to: | PaperBLAST |
Q88K85: shikimate dehydrogenase (EC 1.1.1.25); quinate/shikimate dehydrogenase (EC 1.1.1.282) from Pseudomonas putida | 28% id, 91% cov |
A4QB65: shikimate dehydrogenase (EC 1.1.1.25); quinate/shikimate dehydrogenase (EC 1.1.1.282) from Corynebacterium glutamicum | 27% id, 93% cov |
Q9X5C9: quinate dehydrogenase (EC 1.1.1.24); quinate/shikimate dehydrogenase (EC 1.1.1.282) from Corynebacterium glutamicum | 26% id, 93% cov |
| H281DRAFT_01425: NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family is similar to: | PaperBLAST |
Q88K85: shikimate dehydrogenase (EC 1.1.1.25); quinate/shikimate dehydrogenase (EC 1.1.1.282) from Pseudomonas putida | 30% id, 28% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory