Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 6 curated entries in PaperBLAST's database that match '1.1.1.60' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_00785: 2-hydroxy-3-oxopropionate reductase
is similar to:
PaperBLAST

glxR / P77161: tartronate semialdehyde reductase 2 (EC 1.1.1.60) from Escherichia coli

66% id,
100% cov

Q8ZLV8: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Salmonella enterica

41% id,
99% cov

GARR_ECOLI / P0ABQ2: 2-hydroxy-3-oxopropionate reductase; Tartronate semialdehyde reductase; TSAR; EC 1.1.1.60 from Escherichia coli
YhaE / b3125: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli
garR / P0ABQ2: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli

41% id,
100% cov

H281DRAFT_05314: 2-hydroxy-3-oxopropionate reductase
is similar to:
PaperBLAST

glxR / P77161: tartronate semialdehyde reductase 2 (EC 1.1.1.60) from Escherichia coli

64% id,
100% cov

GARR_ECOLI / P0ABQ2: 2-hydroxy-3-oxopropionate reductase; Tartronate semialdehyde reductase; TSAR; EC 1.1.1.60 from Escherichia coli
YhaE / b3125: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli
garR / P0ABQ2: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli

47% id,
99% cov

Q8ZLV8: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Salmonella enterica

46% id,
99% cov

H281DRAFT_01201: 3-hydroxyisobutyrate dehydrogenase
is similar to:
PaperBLAST

GARR_ECOLI / P0ABQ2: 2-hydroxy-3-oxopropionate reductase; Tartronate semialdehyde reductase; TSAR; EC 1.1.1.60 from Escherichia coli
YhaE / b3125: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli
garR / P0ABQ2: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli

35% id,
97% cov

Q8ZLV8: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Salmonella enterica

35% id,
96% cov

glxR / P77161: tartronate semialdehyde reductase 2 (EC 1.1.1.60) from Escherichia coli

35% id,
96% cov

H281DRAFT_01510: 3-hydroxyisobutyrate dehydrogenase
is similar to:
PaperBLAST

Q8ZLV8: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Salmonella enterica

34% id,
95% cov

GARR_ECOLI / P0ABQ2: 2-hydroxy-3-oxopropionate reductase; Tartronate semialdehyde reductase; TSAR; EC 1.1.1.60 from Escherichia coli
YhaE / b3125: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli
garR / P0ABQ2: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli

34% id,
95% cov

glxR / P77161: tartronate semialdehyde reductase 2 (EC 1.1.1.60) from Escherichia coli

27% id,
96% cov

H281DRAFT_00028: 3-hydroxyisobutyrate dehydrogenase
is similar to:
PaperBLAST

GARR_ECOLI / P0ABQ2: 2-hydroxy-3-oxopropionate reductase; Tartronate semialdehyde reductase; TSAR; EC 1.1.1.60 from Escherichia coli
YhaE / b3125: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli
garR / P0ABQ2: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli

32% id,
95% cov

Q8ZLV8: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Salmonella enterica

34% id,
88% cov

glxR / P77161: tartronate semialdehyde reductase 2 (EC 1.1.1.60) from Escherichia coli

28% id,
99% cov

H281DRAFT_01053: 3-hydroxyisobutyrate dehydrogenase
is similar to:
PaperBLAST

GARR_ECOLI / P0ABQ2: 2-hydroxy-3-oxopropionate reductase; Tartronate semialdehyde reductase; TSAR; EC 1.1.1.60 from Escherichia coli
YhaE / b3125: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli
garR / P0ABQ2: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli

32% id,
92% cov

Q8ZLV8: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Salmonella enterica

32% id,
91% cov

glxR / P77161: tartronate semialdehyde reductase 2 (EC 1.1.1.60) from Escherichia coli

26% id,
98% cov

H281DRAFT_05835: 3-hydroxyisobutyrate dehydrogenase
is similar to:
PaperBLAST

glxR / P77161: tartronate semialdehyde reductase 2 (EC 1.1.1.60) from Escherichia coli

29% id,
97% cov

Q8ZLV8: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) from Salmonella enterica

29% id,
95% cov

GARR_ECOLI / P0ABQ2: 2-hydroxy-3-oxopropionate reductase; Tartronate semialdehyde reductase; TSAR; EC 1.1.1.60 from Escherichia coli
YhaE / b3125: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli
garR / P0ABQ2: tartronate semialdehyde reductase (EC 1.1.1.60) from Escherichia coli

29% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory