Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 37 curated entries in PaperBLAST's database that match '1.1.99.2'.

These curated entries have 29 distinct sequences.

Running ublast with E ≤ 0.01

Found 22 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_02753: Predicted dehydrogenase
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

44% id,
97% cov

H281DRAFT_02167: L-2-hydroxyglutarate oxidase LhgO
is similar to:
PaperBLAST

L2HDH_ARATH / Q9LES4: L-2-hydroxyglutarate dehydrogenase, mitochondrial; EC 1.1.99.2 from Arabidopsis thaliana

49% id,
83% cov

L2HDH_HUMAN / Q9H9P8: L-2-hydroxyglutarate dehydrogenase, mitochondrial; Duranin; EC 1.1.99.2 from Homo sapiens
Q9H9P8: L-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) from Homo sapiens

34% id,
61% cov

H281DRAFT_02463: choline dehydrogenase
is similar to:
PaperBLAST

Q2HXX0: alkan-1-ol dehydrogenase (acceptor) (EC 1.1.99.20) from Ensifer sp.

41% id,
95% cov

PDH1_AGAXA / V5NC32: Pyranose dehydrogenase; PDH; Pyranose:quinone oxidoreductase 1; EC 1.1.99.29 from Agaricus xanthodermus
V5NC32: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Agaricus xanthodermus

30% id,
93% cov

PDH2_LEUMG / Q3L243: Pyranose dehydrogenase 2; PDH 2; Pyranose:quinone oxidoreductase 2; EC 1.1.99.29 from Leucoagaricus meleagris
Q3L243: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Leucoagaricus meleagris

29% id,
93% cov

More...

H281DRAFT_05794: Choline dehydrogenase
is similar to:
PaperBLAST

Q2HXX0: alkan-1-ol dehydrogenase (acceptor) (EC 1.1.99.20) from Ensifer sp.

39% id,
96% cov

PDH3_LEUMG / Q0R4L2: Pyranose dehydrogenase 3; PDH 3; Pyranose:quinone oxidoreductase 3; EC 1.1.99.29 from Leucoagaricus meleagris
Q0R4L2: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Leucoagaricus meleagris

30% id,
93% cov

PDH1_LEUMG / Q3L245: Pyranose dehydrogenase 1; PDH 1; Pyranose:quinone oxidoreductase 1; EC 1.1.99.29 from Leucoagaricus meleagris

29% id,
93% cov

More...

H281DRAFT_00975: choline dehydrogenase
is similar to:
PaperBLAST

Q2HXX0: alkan-1-ol dehydrogenase (acceptor) (EC 1.1.99.20) from Ensifer sp.

38% id,
98% cov

PDH3_LEUMG / Q0R4L2: Pyranose dehydrogenase 3; PDH 3; Pyranose:quinone oxidoreductase 3; EC 1.1.99.29 from Leucoagaricus meleagris
Q0R4L2: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Leucoagaricus meleagris

28% id,
94% cov

PDH1_AGAXA / V5NC32: Pyranose dehydrogenase; PDH; Pyranose:quinone oxidoreductase 1; EC 1.1.99.29 from Agaricus xanthodermus
V5NC32: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Agaricus xanthodermus

28% id,
93% cov

More...

H281DRAFT_02374: choline dehydrogenase
is similar to:
PaperBLAST

Q2HXX0: alkan-1-ol dehydrogenase (acceptor) (EC 1.1.99.20) from Ensifer sp.

36% id,
98% cov

PDH1_AGABI / Q3L1D1: Pyranose dehydrogenase; PDH; Glucose dehydrogenase; GDH; Pyranose 2-dehydrogenase; Pyranose:quinone oxidoreductase; EC 1.1.99.29 from Agaricus bisporus
Q3L1D1: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Agaricus bisporus

31% id,
93% cov

PDH1_AGAXA / V5NC32: Pyranose dehydrogenase; PDH; Pyranose:quinone oxidoreductase 1; EC 1.1.99.29 from Agaricus xanthodermus
V5NC32: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Agaricus xanthodermus

30% id,
93% cov

More...

H281DRAFT_03298: quinoprotein glucose dehydrogenase
is similar to:
PaperBLAST

Q70JN9: gluconate 5-dehydrogenase (EC 1.1.1.69); D-sorbitol dehydrogenase (acceptor) (subunit 1/2) (EC 1.1.99.21) from Gluconobacter oxydans

34% id,
99% cov

sldA / Q8KIL1: D-sorbitol dehydrogenase large subunit (EC 1.1.99.21) from Gluconobacter thailandicus

41% id,
70% cov

sldA / Q8KIL1: D-sorbitol dehydrogenase large subunit (EC 1.1.99.21) from Gluconobacter thailandicus

40% id,
16% cov

H281DRAFT_03365: choline dehydrogenase
is similar to:
PaperBLAST

Q2HXX0: alkan-1-ol dehydrogenase (acceptor) (EC 1.1.99.20) from Ensifer sp.

35% id,
95% cov

PDH1_LEUMG / Q3L245: Pyranose dehydrogenase 1; PDH 1; Pyranose:quinone oxidoreductase 1; EC 1.1.99.29 from Leucoagaricus meleagris

27% id,
92% cov

PDH1_AGABI / Q3L1D1: Pyranose dehydrogenase; PDH; Glucose dehydrogenase; GDH; Pyranose 2-dehydrogenase; Pyranose:quinone oxidoreductase; EC 1.1.99.29 from Agaricus bisporus
Q3L1D1: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Agaricus bisporus

33% id,
51% cov

More...

H281DRAFT_05508: Alcohol dehydrogenase, class IV
is similar to:
PaperBLAST

K0T042: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Thalassiosira oceanica

29% id,
90% cov

HOT_RAT / Q4QQW3: Hydroxyacid-oxoacid transhydrogenase, mitochondrial; HOT; Alcohol dehydrogenase iron-containing protein 1; ADHFe1; EC 1.1.99.24 from Rattus norvegicus

30% id,
86% cov

HOT_MOUSE / Q8R0N6: Hydroxyacid-oxoacid transhydrogenase, mitochondrial; HOT; Alcohol dehydrogenase iron-containing protein 1; ADHFe1; EC 1.1.99.24 from Mus musculus

30% id,
87% cov

More...

H281DRAFT_03803: alcohol dehydrogenase
is similar to:
PaperBLAST

HOT_HUMAN / Q8IWW8: Hydroxyacid-oxoacid transhydrogenase, mitochondrial; HOT; Alcohol dehydrogenase iron-containing protein 1; ADHFe1; Fe-containing alcohol dehydrogenase; EC 1.1.99.24 from Homo sapiens
Q8IWW8: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Homo sapiens

29% id,
88% cov

B7FWP2: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Phaeodactylum tricornutum

29% id,
86% cov

HOT_RAT / Q4QQW3: Hydroxyacid-oxoacid transhydrogenase, mitochondrial; HOT; Alcohol dehydrogenase iron-containing protein 1; ADHFe1; EC 1.1.99.24 from Rattus norvegicus

26% id,
94% cov

More...

H281DRAFT_01540: 5-(hydroxymethyl)furfural/furfural oxidase
is similar to:
PaperBLAST

PDH1_AGACM / V5NDL4: Pyranose dehydrogenase; PDH; Pyranose:quinone oxidoreductase 1; EC 1.1.99.29 from Agaricus campestris
V5NDL4: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Agaricus campestris

25% id,
87% cov

Q2HXX0: alkan-1-ol dehydrogenase (acceptor) (EC 1.1.99.20) from Ensifer sp.

36% id,
53% cov

PDH1_AGAXA / V5NC32: Pyranose dehydrogenase; PDH; Pyranose:quinone oxidoreductase 1; EC 1.1.99.29 from Agaricus xanthodermus
V5NC32: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Agaricus xanthodermus

29% id,
61% cov

More...

H281DRAFT_01136: 5-(hydroxymethyl)furfural/furfural oxidase
is similar to:
PaperBLAST

Q2HXX0: alkan-1-ol dehydrogenase (acceptor) (EC 1.1.99.20) from Ensifer sp.

38% id,
53% cov

PDH3_LEUMG / Q0R4L2: Pyranose dehydrogenase 3; PDH 3; Pyranose:quinone oxidoreductase 3; EC 1.1.99.29 from Leucoagaricus meleagris
Q0R4L2: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Leucoagaricus meleagris

33% id,
51% cov

PDH1_AGAXA / V5NC32: Pyranose dehydrogenase; PDH; Pyranose:quinone oxidoreductase 1; EC 1.1.99.29 from Agaricus xanthodermus
V5NC32: pyranose dehydrogenase (acceptor) (EC 1.1.99.29) from Agaricus xanthodermus

33% id,
51% cov

More...

H281DRAFT_00740: Predicted dehydrogenase
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

30% id,
60% cov

H281DRAFT_01678: Predicted dehydrogenase
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

24% id,
74% cov

H281DRAFT_00108: Predicted dehydrogenase
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

28% id,
61% cov

H281DRAFT_04465: myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

28% id,
56% cov

H281DRAFT_02415: Predicted dehydrogenase
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

26% id,
59% cov

H281DRAFT_02456: sarcosine oxidase subunit beta
is similar to:
PaperBLAST

L2HDH_HUMAN / Q9H9P8: L-2-hydroxyglutarate dehydrogenase, mitochondrial; Duranin; EC 1.1.99.2 from Homo sapiens
Q9H9P8: L-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) from Homo sapiens

27% id,
48% cov

H281DRAFT_01296: PQQ-dependent dehydrogenase, methanol/ethanol family
is similar to:
PaperBLAST

sldA / Q8KIL1: D-sorbitol dehydrogenase large subunit (EC 1.1.99.21) from Gluconobacter thailandicus

25% id,
51% cov

Q70JN9: gluconate 5-dehydrogenase (EC 1.1.1.69); D-sorbitol dehydrogenase (acceptor) (subunit 1/2) (EC 1.1.99.21) from Gluconobacter oxydans

26% id,
47% cov

H281DRAFT_02523: Predicted dehydrogenase
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

30% id,
40% cov

H281DRAFT_01832: Glycine/D-amino acid oxidase (deaminating)
is similar to:
PaperBLAST

L2HDH_HUMAN / Q9H9P8: L-2-hydroxyglutarate dehydrogenase, mitochondrial; Duranin; EC 1.1.99.2 from Homo sapiens
Q9H9P8: L-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) from Homo sapiens

22% id,
50% cov

H281DRAFT_03160: D-amino-acid dehydrogenase
is similar to:
PaperBLAST

L2HDH_ARATH / Q9LES4: L-2-hydroxyglutarate dehydrogenase, mitochondrial; EC 1.1.99.2 from Arabidopsis thaliana

37% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 20 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

88702-89907 (frame -3) on H281DRAFT_scaffold00013.13
is similar to:
PaperBLAST

K0T042: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Thalassiosira oceanica
Also see hits to annotated proteins above

28% id,
96% cov

324299-325492 (frame -2) on H281DRAFT_scaffold00006.6
is similar to:
PaperBLAST

HOT_HUMAN / Q8IWW8: Hydroxyacid-oxoacid transhydrogenase, mitochondrial; HOT; Alcohol dehydrogenase iron-containing protein 1; ADHFe1; Fe-containing alcohol dehydrogenase; EC 1.1.99.24 from Homo sapiens
Q8IWW8: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Homo sapiens
Also see hits to annotated proteins above

29% id,
92% cov

HOT_MOUSE / Q8R0N6: Hydroxyacid-oxoacid transhydrogenase, mitochondrial; HOT; Alcohol dehydrogenase iron-containing protein 1; ADHFe1; EC 1.1.99.24 from Mus musculus
Also see hits to annotated proteins above

27% id,
92% cov

X6NPJ7: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Reticulomyxa filosa
Also see hits to annotated proteins above

26% id,
90% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory