Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 30 curated entries in PaperBLAST's database that match '1.13.11.11' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_04144: Tryptophan 2,3-dioxygenase holoenzyme /Tryptophan 2,3-dioxygenase apoenzyme is similar to:	PaperBLAST
T23O_CUPMC / Q1LK00: Tryptophan 2,3-dioxygenase; TDO; Tryptamin 2,3-dioxygenase; Tryptophan oxygenase; TO; TRPO; Tryptophan pyrrolase; Tryptophanase; EC 1.13.11.11 from Cupriavidus metallidurans kynA: tryptophan 2,3-dioxygenase; EC 1.13.11.11 from Ralstonia metallidurans	71% id, 99% cov
RR42_RS15390: Tryptophan 2,3-dioxygenase (EC 1.13.11.11) from Cupriavidus basilensis	72% id, 98% cov
PfGW456L13_4292: Tryptophan 2,3-dioxygenase (EC 1.13.11.11) from Pseudomonas fluorescens	66% id, 100% cov
PS417_23705: Tryptophan 2,3-dioxygenase (EC 1.13.11.11) from Pseudomonas simiae	67% id, 99% cov
AO353_05970: Tryptophan 2,3-dioxygenase (EC 1.13.11.11) from Pseudomonas fluorescens	65% id, 99% cov
T23O_PSEFL / Q84HF6: Tryptophan 2,3-dioxygenase; TDO; Tryptamin 2,3-dioxygenase; Tryptophan oxygenase; TO; TRPO; Tryptophan pyrrolase; Tryptophanase; EC 1.13.11.11 from Pseudomonas fluorescens	58% id, 99% cov
T23O_XANCP / Q8PDA8: Tryptophan 2,3-dioxygenase; TDO; Tryptamin 2,3-dioxygenase; Tryptophan oxygenase; TO; TRPO; Tryptophan pyrrolase; Tryptophanase; EC 1.13.11.11 from Xanthomonas campestris kynA: tryptophan 2,3-dioxygenase; EC 1.13.11.11 from Xanthomonas campestris Q8PDA8: tryptophan 2,3-dioxygenase (EC 1.13.11.11); indoleamine 2,3-dioxygenase (EC 1.13.11.52) from Xanthomonas campestris	50% id, 89% cov
acmG / D6R243: tryptophan 2,3-dioxygenase (EC 1.13.11.11) from Streptomyces anulatus	41% id, 99% cov
sibP / C0LTN0: tryptophan 2,3-dioxygenase (EC 1.13.11.11) from Streptosporangium sibiricum	37% id, 100% cov
T23O_DROME / P20351: Tryptophan 2,3-dioxygenase; TDO; Protein vermilion; Tryptamin 2,3-dioxygenase; Tryptophan oxygenase; TO; TRPO; Tryptophan pyrrolase; Tryptophanase; EC 1.13.11.11 from Drosophila melanogaster P20351: tryptophan 2,3-dioxygenase (EC 1.13.11.11); indoleamine 2,3-dioxygenase (EC 1.13.11.52) from Drosophila melanogaster	35% id, 51% cov
T23O_TRICA / Q95NN1: Tryptophan 2,3-dioxygenase; TDO; Tryptamin 2,3-dioxygenase; Tryptophan oxygenase; TO; TRPO; Tryptophan pyrrolase; Tryptophanase; EC 1.13.11.11 from Tribolium castaneum	37% id, 46% cov
T23O_AEDAE / Q17P71: Tryptophan 2,3-dioxygenase; TDO; Tryptamin 2,3-dioxygenase; Tryptophan oxygenase; TO; TRPO; Tryptophan pyrrolase; Tryptophanase; EC 1.13.11.11 from Aedes aegypti	34% id, 50% cov
T23O_CAEEL / Q09474: Tryptophan 2,3-dioxygenase; TDO; Tryptamin 2,3-dioxygenase; Tryptophan oxygenase; TO; TRPO; Tryptophan pyrrolase; Tryptophanase; EC 1.13.11.11 from Caenorhabditis elegans Q09474: tryptophan 2,3-dioxygenase (EC 1.13.11.11) from Caenorhabditis elegans	27% id, 60% cov
T23O_HUMAN / P48775: Tryptophan 2,3-dioxygenase; TDO; Tryptamin 2,3-dioxygenase; Tryptophan oxygenase; TO; TRPO; Tryptophan pyrrolase; Tryptophanase; EC 1.13.11.11 from Homo sapiens TDO2 / P48775: tryptophan 2,3-dioxygenase monomer (EC 1.13.11.11) from Homo sapiens P48775: tryptophan 2,3-dioxygenase (EC 1.13.11.11); indoleamine 2,3-dioxygenase (EC 1.13.11.52) from Homo sapiens	37% id, 44% cov
A7RFF0: tryptophan 2,3-dioxygenase (EC 1.13.11.11) from Nematostella vectensis	28% id, 56% cov
T23O_RAT / P21643: Tryptophan 2,3-dioxygenase; TDO; Tryptamin 2,3-dioxygenase; Tryptophan oxygenase; TO; TRPO; Tryptophan pyrrolase; Tryptophanase; EC 1.13.11.11 from Rattus norvegicus P21643: tryptophan 2,3-dioxygenase (EC 1.13.11.11); indoleamine 2,3-dioxygenase (EC 1.13.11.52) from Rattus norvegicus	38% id, 41% cov
P48776: tryptophan 2,3-dioxygenase (EC 1.13.11.11); indoleamine 2,3-dioxygenase (EC 1.13.11.52) from Mus musculus	37% id, 41% cov
A9V766: tryptophan 2,3-dioxygenase (EC 1.13.11.11) from Monosiga brevicollis	33% id, 45% cov
T23O_RAT / P21643: Tryptophan 2,3-dioxygenase; TDO; Tryptamin 2,3-dioxygenase; Tryptophan oxygenase; TO; TRPO; Tryptophan pyrrolase; Tryptophanase; EC 1.13.11.11 from Rattus norvegicus P21643: tryptophan 2,3-dioxygenase (EC 1.13.11.11); indoleamine 2,3-dioxygenase (EC 1.13.11.52) from Rattus norvegicus	26% id, 51% cov
P48776: tryptophan 2,3-dioxygenase (EC 1.13.11.11); indoleamine 2,3-dioxygenase (EC 1.13.11.52) from Mus musculus	26% id, 51% cov
T23O_HUMAN / P48775: Tryptophan 2,3-dioxygenase; TDO; Tryptamin 2,3-dioxygenase; Tryptophan oxygenase; TO; TRPO; Tryptophan pyrrolase; Tryptophanase; EC 1.13.11.11 from Homo sapiens TDO2 / P48775: tryptophan 2,3-dioxygenase monomer (EC 1.13.11.11) from Homo sapiens P48775: tryptophan 2,3-dioxygenase (EC 1.13.11.11); indoleamine 2,3-dioxygenase (EC 1.13.11.52) from Homo sapiens	32% id, 20% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory