Curated BLAST for Genomes

 

Curated BLAST

Searching in Paraburkholderia bryophila 376MFSha3.1 (Burk376)

Found 27 curated entries in PaperBLAST's database that match '1.13.11.27'.

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Paraburkholderia bryophila 376MFSha3.1, or try another query

H281DRAFT_00821: 4-carboxymuconolactone decarboxylase
is similar to:
PaperBLAST

Q8EKK9: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Shewanella oneidensis

60% id,
96% cov

H281DRAFT_05849: 4-hydroxyphenylpyruvate dioxygenase
is similar to:
PaperBLAST

Pf6N2E2_456: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens

58% id,
98% cov

AO353_26925: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens

57% id,
99% cov

Psest_3514: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas stutzeri

59% id,
97% cov

More...

H281DRAFT_03867: 4-hydroxyphenylpyruvate dioxygenase
is similar to:
PaperBLAST

Ac3H11_1849: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Acidovorax sp.

43% id,
94% cov

Pf6N2E2_456: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens

42% id,
96% cov

AO356_22845: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens

42% id,
96% cov

More...

H281DRAFT_01593: 4-carboxymuconolactone decarboxylase
is similar to:
PaperBLAST

Q8EKK9: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Shewanella oneidensis

34% id,
98% cov

H281DRAFT_03214: 4-hydroxyphenylpyruvate dioxygenase
is similar to:
PaperBLAST

LLY_LEGPC / P69053: 4-hydroxyphenylpyruvate dioxygenase; 4HPPD; HPD; HPPDase; Legiolysin; EC 1.13.11.27 from Legionella pneumophila

34% id,
91% cov

Pf6N2E2_456: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens

31% id,
94% cov

AO356_22845: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas fluorescens

31% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory